RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 SFXN1Q9H9B4 322 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 PRUNE2Q8WUY3 3088 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 REV3LO60673 3130 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 IKBKBO14920 756 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 ADAM12O43184 909 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 OAZ2O95190 189 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 RARS2Q5T160 578 aaKnown RBP27.93■■■□□ 2.06
DDR1-279ENST00000515529 SLC8B1Q6J4K2 584 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 THEM5Q8N1Q8 247 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 SMRP1Q8NCR6 262 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 CXorf38Q8TB03 319 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 ZNF516Q92618 1163 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 GZF1Q9H116 711 aaPredicted RBP27.93■■■□□ 2.06
DDR1-279ENST00000515529 SNX9Q9Y5X1 595 aa27.93■■■□□ 2.06
DDR1-279ENST00000515529 SCN1AP35498 2009 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 OR6C75A6NL08 312 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 CYP11A1P05108 521 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 CPB1P15086 417 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 DLG4P78352 724 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 CLDN10P78369 228 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 ITIH3Q06033 890 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 ENPEPQ07075 957 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 SYCE2Q6PIF2 218 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 RSPO2Q6UXX9 243 aaPredicted RBP27.92■■■□□ 2.06
DDR1-279ENST00000515529 MLKLQ8NB16 471 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 CEP63Q96MT8 703 aa27.92■■■□□ 2.06
DDR1-279ENST00000515529 MBTPS2O43462 519 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 STX10O60499 249 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 TRIM49P0CI25 452 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 TRIM49CP0CI26 452 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 ELF1P32519 619 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 STX17P56962 302 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 ROR1Q01973 937 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 TDRD10Q5VZ19 366 aaKnown RBP27.91■■■□□ 2.06
DDR1-279ENST00000515529 WSCD1Q658N2 575 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 LILRA6Q6PI73 481 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 ZC3H3Q8IXZ2 948 aaKnown RBP27.91■■■□□ 2.06
DDR1-279ENST00000515529 C12orf76Q8N812 135 aaPredicted RBP27.91■■■□□ 2.06
DDR1-279ENST00000515529 SYAP1Q96A49 352 aaPredicted RBP27.91■■■□□ 2.06
DDR1-279ENST00000515529 BORCS6Q96GS4 357 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 GDAP2Q9NXN4 497 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 DACH1Q9UI36 760 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 FBXW11Q9UKB1 542 aa27.91■■■□□ 2.06
DDR1-279ENST00000515529 GRXCR2A6NFK2 248 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 TBC1D4O60343 1298 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 ATICP31939 592 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 TNNC1P63316 161 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 CCDC40Q4G0X9 1142 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 TCERG1LQ5VWI1 586 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 TTI2Q6NXR4 508 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 FOXR2Q6PJQ5 311 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 TMEM86AQ8N2M4 240 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 ADAM7Q9H2U9 754 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 MMRN2Q9H8L6 949 aa27.9■■■□□ 2.06
DDR1-279ENST00000515529 USP15Q9Y4E8 981 aaPredicted RBP27.9■■■□□ 2.06
DDR1-279ENST00000515529 FGFR1OPO95684 399 aaKnown RBP27.89■■■□□ 2.06
DDR1-279ENST00000515529 CST3P01034 146 aaPredicted RBP27.89■■■□□ 2.06
DDR1-279ENST00000515529 C4BPAP04003 597 aaKnown RBP27.89■■■□□ 2.06
DDR1-279ENST00000515529 MYL6P60660 151 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 NCOA4Q13772 614 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 TPGS2Q68CL5 300 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 TMC5Q6UXY8 1006 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 CCDC149Q6ZUS6 474 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 TOP6BLQ8N6T0 577 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 ZNF461Q8TAF7 563 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 RIPOR3Q96MK2 946 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 MMS19Q96T76 1030 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 S1PR5Q9H228 398 aa27.89■■■□□ 2.06
DDR1-279ENST00000515529 METTL14Q9HCE5 456 aaKnown RBP27.89■■■□□ 2.06
DDR1-279ENST00000515529 ARMCX3Q9UH62 379 aaPredicted RBP27.89■■■□□ 2.06
DDR1-279ENST00000515529 BMP1P13497 986 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 PIK3CAP42336 1068 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 GCLMP48507 274 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 PLXNA3P51805 1871 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 ZNF699Q32M78 642 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 ZACNQ401N2 412 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 DCAF17Q5H9S7 520 aaPredicted RBP27.88■■■□□ 2.05
DDR1-279ENST00000515529 PPM1LQ5SGD2 360 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 SCARA3Q6AZY7 606 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 SV2AQ7L0J3 742 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 PDCL2Q8N4E4 241 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 DUSP9Q99956 384 aaKnown RBP27.88■■■□□ 2.05
DDR1-279ENST00000515529 ZDHHC7Q9NXF8 308 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 RWDD2AQ9UIY3 292 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 L1RE1Q9UN81 338 aa27.88■■■□□ 2.05
DDR1-279ENST00000515529 WDR27A2RRH5 827 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 PRRG1O14668 218 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 IL9P15248 144 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 GTF2H1P32780 548 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 MTHFRP42898 656 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 NLRP12P59046 1061 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 SMAD2Q15796 467 aaKnown RBP27.87■■■□□ 2.05
DDR1-279ENST00000515529 WDR72Q3MJ13 1102 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 ATAT1Q5SQI0 421 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 CCDC183Q5T5S1 534 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 DPH6Q7L8W6 267 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 FILIP1Q7Z7B0 1213 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 ADGRF2Q8IZF7 708 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 SPATA18Q8TC71 538 aa27.87■■■□□ 2.05
DDR1-279ENST00000515529 IMPG2Q9BZV3 1241 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms