RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CHST12Q9NRB3 414 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 DERAQ9Y315 318 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 SNX9Q9Y5X1 595 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 MRFAP1Q9Y605 127 aa9.77□□□□□ -0.84
CPNE4-213ENST00000515418 DNM1LO00429 736 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 SPTLC1O15269 473 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 GZMAP12544 262 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 UNGP13051 313 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-213ENST00000515418 ITGA4P13612 1032 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 KCNE1P15382 129 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 MLH1P40692 756 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 RAD23BP54727 409 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 C1QTNF8P60827 252 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 AMPD2Q01433 879 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 XKR4Q5GH76 650 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 ACAD10Q6JQN1 1059 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 ELOVL4Q9GZR5 314 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 INTUQ9ULD6 942 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 UBQLN1Q9UMX0 589 aaKnown RBP9.77□□□□□ -0.85
CPNE4-213ENST00000515418 HYOU1Q9Y4L1 999 aa9.77□□□□□ -0.85
CPNE4-213ENST00000515418 RALGAPA2Q2PPJ7 1873 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 ANO9A1A5B4 782 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 ARL5CA6NH57 179 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 BTNL10A8MVZ5 291 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 PIRO00625 290 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 TLR3O15455 904 aaKnown RBP9.76□□□□□ -0.85
CPNE4-213ENST00000515418 HCRTO43612 131 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 CDR1P51861 262 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 TNNC1P63316 161 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 GPC5P78333 572 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 MYO1EQ12965 1108 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 DSC3Q14574 896 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 PAPD7Q5XG87 772 aaKnown RBP9.76□□□□□ -0.85
CPNE4-213ENST00000515418 DPH6Q7L8W6 267 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 CAPZA3Q96KX2 299 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 ALS2CR12Q96Q35 445 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 MRPL45Q9BRJ2 306 aaKnown RBP9.76□□□□□ -0.85
CPNE4-213ENST00000515418 TLR10Q9BXR5 811 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 VRTNQ9H8Y1 702 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 CDC23Q9UJX2 597 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 OGDHLQ9ULD0 1010 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 JRKLQ9Y4A0 524 aa9.76□□□□□ -0.85
CPNE4-213ENST00000515418 A0A0U1RQF3 1178 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 PQBP1O60828 265 aaKnown RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 CILPO75339 1184 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 SLU7O95391 586 aaKnown RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 CYP1A1P04798 512 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 RPLP2P05387 115 aaKnown RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 CD19P15391 556 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 ATF7P17544 494 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 NDST1P52848 882 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 SOWAHAQ2M3V2 549 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 MRPL10Q7Z7H8 261 aaKnown RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 ZNF677Q86XU0 584 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 FAM126BQ8IXS8 530 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 C12orf29Q8N999 325 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 LRRC57Q8N9N7 239 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 COG1Q8WTW3 980 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 RFFLQ8WZ73 363 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 BTBD6Q96KE9 485 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 HEXIM2Q96MH2 286 aaKnown RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 PPP1R10Q96QC0 940 aaKnown RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 LPIN3Q9BQK8 851 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 PAAF1Q9BRP4 392 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 CTTNBP2NLQ9P2B4 639 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 NME7Q9Y5B8 376 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 PCDHGC5Q9Y5F6 944 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 SAR1BQ9Y6B6 198 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 A0A0A6YYK5 440 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 BUB1BO60566 1050 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 POMCP01189 267 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 P4HA1P13674 534 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 MNX1P50219 401 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-213ENST00000515418 SCNN1GP51170 649 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 NOMO3P69849 1222 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 GPNMBQ14956 572 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 DAAM2Q86T65 1068 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 MCOLN2Q8IZK6 566 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 WDTC1Q8N5D0 677 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 ZNF653Q96CK0 615 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 TMEM176AQ96HP8 235 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 CYP3A43Q9HB55 503 aa9.75□□□□□ -0.85
CPNE4-213ENST00000515418 TMEM110-MUSTN1A8MSY1 372 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 KPNA7A9QM74 516 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 NBNO60934 754 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 ZNF623O75123 536 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 GJB6O95452 261 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 STAU1O95793 577 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CD4P01730 458 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 THP07101 528 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 PDGFRBP09619 1106 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 RRM1P23921 792 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 NSFP46459 744 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 TERF1P54274 439 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 LILRA4P59901 499 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 YWHAEP62258 255 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 MEI1Q5TIA1 1274 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 DENND1BQ6P3S1 775 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms