RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SPOPLQ6IQ16 392 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 TMEM270Q6UE05 265 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 CATSPER4Q7RTX7 472 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNF8-214ENST00000515174 C1orf127Q8N9H9 656 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 EIF1ADQ8N9N8 165 aaKnown RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 NOA1Q8NC60 698 aaKnown RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 CAGE1Q8TC20 777 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 ZNF668Q96K58 619 aaPredicted RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 ARID3AQ99856 593 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 OSGEPQ9NPF4 335 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 CISHQ9NSE2 258 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 SEPT11Q9NVA2 429 aaKnown RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 CTTNBP2NLQ9P2B4 639 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 KIAA1257Q9ULG3 409 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 COG5Q9UP83 839 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 ALG6Q9Y672 507 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 RALGAPA2Q2PPJ7 1873 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 ALPK3Q96L96 1907 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 A0A0U1RQG5 324 aaPredicted RBP10.88□□□□□ -0.67
SNF8-214ENST00000515174 TMCO5BA8MYB1 307 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 CCDC188H7C350 402 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 DDX3YO15523 660 aaKnown RBP10.88□□□□□ -0.67
SNF8-214ENST00000515174 TREHO43280 583 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 NCK2O43639 380 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 ERLIN1O75477 346 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 NFICP08651 508 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 C6orf222P0C671 652 aaPredicted RBP10.88□□□□□ -0.67
SNF8-214ENST00000515174 RARBP10826 455 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 ABCB4P21439 1286 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 CTNNA2P26232 953 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 SLC1A1P43005 524 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 ASPAP45381 313 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 NOMO3P69849 1222 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 TMEM132DQ14C87 1099 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 SNX17Q15036 470 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 GNASQ5JWF2 1037 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 TAF3Q5VWG9 929 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 JADE1Q6IE81 842 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 PLEKHA7Q6IQ23 1121 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 TMCO3Q6UWJ1 677 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 RUFY4Q6ZNE9 571 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 FAM43BQ6ZT52 329 aaPredicted RBP10.88□□□□□ -0.67
SNF8-214ENST00000515174 MON1BQ7L1V2 547 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 TMEM192Q8IY95 271 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 LRRC52Q8N7C0 313 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 C7orf31Q8N865 590 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 USP38Q8NB14 1042 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 DNAJB3Q8WWF6 145 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 CD101Q93033 1021 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 FAM212AQ96EL1 285 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 CPB2Q96IY4 423 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 CAPZA3Q96KX2 299 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 SCLT1Q96NL6 688 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 NAP1L3Q99457 506 aaPredicted RBP10.88□□□□□ -0.67
SNF8-214ENST00000515174 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNF8-214ENST00000515174 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 MRPL47Q9HD33 250 aaKnown RBP10.88□□□□□ -0.67
SNF8-214ENST00000515174 ARFGAP3Q9NP61 516 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 ACP6Q9NPH0 428 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 CHST12Q9NRB3 414 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 FAM53CQ9NYF3 392 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 CNTN3Q9P232 1028 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 DDX20Q9UHI6 824 aaKnown RBP10.88□□□□□ -0.67
SNF8-214ENST00000515174 GTF2IRD1Q9UHL9 959 aa10.88□□□□□ -0.67
SNF8-214ENST00000515174 UMODL1Q5DID0 1318 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CCDC66A2RUB6 948 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 KCNK3O14649 394 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 MED7O43513 233 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CSDE1O75534 798 aaKnown RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 CABYRO75952 493 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CLSTN1O94985 981 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 KCNE1P15382 129 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CYP3A5P20815 502 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 MMP8P22894 467 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 TNFRSF8P28908 595 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 NSFP46459 744 aaKnown RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 YARSP54577 528 aaKnown RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 GSCP56915 257 aaPredicted RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 OSTNP61366 133 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 PTPN11Q06124 597 aaPredicted RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 INCA1Q0VD86 236 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 PTP4A2Q12974 167 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 LIN9Q5TKA1 542 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CCSAPQ6IQ19 270 aaPredicted RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 CC2D1AQ6P1N0 951 aaPredicted RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 RSPH3Q86UC2 560 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CDR2LQ86X02 465 aaPredicted RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 DNAAF5Q86Y56 855 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 TMEM35BQ8NCS4 154 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 ZNF564Q8TBZ8 553 aaPredicted RBP10.87□□□□□ -0.67
SNF8-214ENST00000515174 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNF8-214ENST00000515174 ZNF653Q96CK0 615 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CYFIP2Q96F07 1278 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 FAM84AQ96KN4 292 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 SNX27Q96L92 541 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 NUP85Q9BW27 656 aa10.87□□□□□ -0.67
SNF8-214ENST00000515174 CELF4Q9BZC1 486 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms