RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TWF1Q12792 350 aa26.45■■□□□ 1.82
SNF8-213ENST00000514929 CUL4BQ13620 913 aa26.45■■□□□ 1.82
SNF8-213ENST00000514929 SV2CQ496J9 727 aa26.45■■□□□ 1.82
SNF8-213ENST00000514929 IQCEQ6IPM2 695 aa26.45■■□□□ 1.82
SNF8-213ENST00000514929 GRAMD1CQ8IYS0 662 aa26.45■■□□□ 1.82
SNF8-213ENST00000514929 ING5Q8WYH8 240 aa26.45■■□□□ 1.82
SNF8-213ENST00000514929 ZNF318Q5VUA4 2279 aa26.45■■□□□ 1.82
SNF8-213ENST00000514929 UBE4BO95155 1302 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 A0A1B0GVL5 298 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 PVALEFA0A1B0GWK0 134 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 ITGB3P05106 788 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 CFHP08603 1231 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 PFKFB1P16118 471 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 CMA1P23946 247 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 AVPR2P30518 371 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 POLR2BP30876 1174 aaKnown RBP26.44■■□□□ 1.82
SNF8-213ENST00000514929 PNPLA4P41247 253 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 GPR17Q13304 367 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 BECN1Q14457 450 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 MTSS1LQ765P7 747 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 NPAS3Q8IXF0 933 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 ZNF512Q96ME7 567 aaPredicted RBP26.44■■□□□ 1.82
SNF8-213ENST00000514929 PDE11AQ9HCR9 933 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 AVENQ9NQS1 362 aaPredicted RBP26.44■■□□□ 1.82
SNF8-213ENST00000514929 HSPBP1Q9NZL4 362 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 AGAP1Q9UPQ3 857 aa26.44■■□□□ 1.82
SNF8-213ENST00000514929 SCN1AP35498 2009 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 ZNF233A6NK53 670 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 KPNA7A9QM74 516 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 SRFP11831 508 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 EHHADHQ08426 723 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 SLC5A9Q2M3M2 681 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 IER5LQ5T953 404 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 PARM1Q6UWI2 310 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 NELFCDQ8IXH7 590 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 THEM5Q8N1Q8 247 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 SCFD1Q8WVM8 642 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 FGF14Q92915 247 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 KIAA1586Q9HCI6 787 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 SLC39A2Q9NP94 309 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 YIPF1Q9Y548 306 aa26.43■■□□□ 1.82
SNF8-213ENST00000514929 TSC2P49815 1807 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 ACTN4O43707 911 aaKnown RBP26.42■■□□□ 1.82
SNF8-213ENST00000514929 TMEM191BP0C7N4 346 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 DUSP4Q13115 394 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 CYP4A22Q5TCH4 519 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 PDZD4Q76G19 769 aaPredicted RBP26.42■■□□□ 1.82
SNF8-213ENST00000514929 HS2ST1Q7LGA3 356 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 CSGALNACT2Q8N6G5 542 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 C1orf127Q8N9H9 656 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 MCRS1Q96EZ8 462 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 PAGE5Q96GU1 130 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 TMEM209Q96SK2 561 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 PRRX2Q99811 253 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 USP25Q9UHP3 1055 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 ITGA11Q9UKX5 1188 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 NOTCH4Q99466 2003 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 KMT2EQ8IZD2 1858 aa26.42■■□□□ 1.82
SNF8-213ENST00000514929 ZNF197O14709 1029 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 TGFB1I1O43294 461 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 VNN2O95498 520 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 KRT19P08727 400 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 PLD1Q13393 1074 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 SURF1Q15526 300 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 WSCD1Q658N2 575 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 CBWD2Q8IUF1 395 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 SIX5Q8N196 739 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 FLCNQ8NFG4 579 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 OR10T2Q8NGX3 314 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 BORCS6Q96GS4 357 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 FAM84AQ96KN4 292 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 MTMR12Q9C0I1 747 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 SCAND2PQ9GZW5 306 aaPredicted RBP26.41■■□□□ 1.82
SNF8-213ENST00000514929 AGPAT3Q9NRZ7 376 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 CEP72Q9P209 647 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 WNT16Q9UBV4 365 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 R3HCC1Q9Y3T6 440 aaKnown RBP26.41■■□□□ 1.82
SNF8-213ENST00000514929 TCHHQ07283 1943 aa26.41■■□□□ 1.82
SNF8-213ENST00000514929 ZDBF2Q9HCK1 2354 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 MTMR11A4FU01 709 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 CEBPBP17676 345 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 ALDH1A3P47895 512 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 SNRPFP62306 86 aaKnown RBP26.4■■□□□ 1.82
SNF8-213ENST00000514929 PRSS36Q5K4E3 855 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 CENPPQ6IPU0 288 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 LRRC52Q8N7C0 313 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 ATAD1Q8NBU5 361 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 ANKRD36BP1Q96IX9 119 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 RPP25Q9BUL9 199 aaKnown RBP26.4■■□□□ 1.82
SNF8-213ENST00000514929 CRISPLD1Q9H336 500 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 GDE1Q9NZC3 331 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 SLC27A5Q9Y2P5 690 aa26.4■■□□□ 1.82
SNF8-213ENST00000514929 CLIC2O15247 247 aa26.39■■□□□ 1.82
SNF8-213ENST00000514929 CYP2J2P51589 502 aa26.39■■□□□ 1.82
SNF8-213ENST00000514929 EPHB3P54753 998 aa26.39■■□□□ 1.82
SNF8-213ENST00000514929 RBP5P82980 135 aa26.39■■□□□ 1.82
SNF8-213ENST00000514929 BFSP1Q12934 665 aa26.39■■□□□ 1.82
SNF8-213ENST00000514929 SLC39A12Q504Y0 691 aa26.39■■□□□ 1.82
SNF8-213ENST00000514929 LMBRD2Q68DH5 695 aaPredicted RBP26.39■■□□□ 1.82
SNF8-213ENST00000514929 ASTLQ6HA08 431 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms