RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 UBQLN1Q9UMX0 589 aaKnown RBP11.96□□□□□ -0.49
UBE2D3-232ENST00000514755 C5orf42Q9H799 3197 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 CLIC2O15247 247 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 EIF3DO15371 548 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 TGM5O43548 720 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 GARTP22102 1010 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 RPL9P32969 192 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 POSTNQ15063 836 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 PSMD5Q16401 504 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 RARS2Q5T160 578 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 ARMCX5Q6P1M9 558 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 NOC3LQ8WTT2 800 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 ZNF592Q92610 1267 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 FBXL18Q96ME1 805 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 MAN1C1Q9NR34 630 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 FNIP2Q9P278 1114 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 SSX2IPQ9Y2D8 614 aa11.95□□□□□ -0.5
UBE2D3-232ENST00000514755 FSD2A1L4K1 749 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 ADH1AP07327 375 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 SRGAP2BP0DMP2 458 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 CYP3A5P20815 502 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 MCM4P33991 863 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 ZP2Q05996 745 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 DPYDQ12882 1025 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 ELAVL2Q12926 359 aaKnown RBP11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 SNW1Q13573 536 aaKnown RBP11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 BMT2Q1RMZ1 405 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 LILRA6Q6PI73 481 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 TMC5Q6UXY8 1006 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 PPFIBP1Q86W92 1011 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 CBWD2Q8IUF1 395 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 BRSK2Q8IWQ3 736 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 CD302Q8IX05 232 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 FMR1NBQ8N0W7 255 aaPredicted RBP11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 GPD1LQ8N335 351 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 ENGASEQ8NFI3 743 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 FAM174AQ8TBP5 190 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 ASB7Q9H672 318 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 AGPAT3Q9NRZ7 376 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 USP25Q9UHP3 1055 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 SCN1AP35498 2009 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 C2orf16Q68DN1 1984 aa11.94□□□□□ -0.5
UBE2D3-232ENST00000514755 TTC28Q96AY4 2481 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 SIAH2O43255 324 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 EXTL3O43909 919 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 GADD45BO75293 160 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 RFPL2O75678 378 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 GLUD1P00367 558 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 HOXB8P17481 243 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 SP100P23497 879 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 MCCD1P59942 119 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 CBX2Q14781 532 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 C9orf57Q5W0N0 161 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 LMBRD2Q68DH5 695 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 STXBP4Q6ZWJ1 553 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 ADHFE1Q8IWW8 467 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 GPR65Q8IYL9 337 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 GJD3Q8N144 294 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 BEST2Q8NFU1 509 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 ERCC4Q92889 916 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 SUSD3Q96L08 255 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 MRGPRX2Q96LB1 330 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 ADAM7Q9H2U9 754 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 POMKQ9H5K3 350 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 PDE11AQ9HCR9 933 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 EXOC1Q9NV70 894 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 RBAKQ9NYW8 714 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 HSPBP1Q9NZL4 362 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 C2CD2Q9Y426 696 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 TIMM13Q9Y5L4 95 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 CDY1Q9Y6F8 540 aa11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 MTCL1Q9Y4B5 1905 aaKnown RBP11.93□□□□□ -0.5
UBE2D3-232ENST00000514755 UBE4BO95155 1302 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 PTPRJQ12913 1337 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 ANO9A1A5B4 782 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 PIRO00625 290 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 TBC1D4O60343 1298 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 GDF9O60383 454 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 OR1D2P34982 312 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 AARSP49588 968 aaKnown RBP eCLIP11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 PNOCQ13519 176 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 MRPL58Q14197 206 aaKnown RBP11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 KNOP1Q1ED39 458 aaKnown RBP11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 ALG2Q9H553 416 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 SFXN1Q9H9B4 322 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 DZANK1Q9NVP4 752 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 DPP3Q9NY33 737 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 FAM50BQ9Y247 325 aa11.92□□□□□ -0.5
UBE2D3-232ENST00000514755 DERAQ9Y315 318 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms