RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CCDC65Q8IXS2 484 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 ELMOD1Q8N336 334 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 LEMD2Q8NC56 503 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 KCNG4Q8TDN1 519 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 TCEAL4Q96EI5 215 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 SAAL1Q96ER3 474 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 ZNF560Q96MR9 790 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 PGLYRP2Q96PD5 576 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 CBWD1Q9BRT8 395 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 DNAJC25Q9H1X3 360 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 CRISPLD1Q9H336 500 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 TMEM206Q9H813 350 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 TBC1D17Q9HA65 648 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 RBAKQ9NYW8 714 aaPredicted RBP11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 DSEQ9UL01 958 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 COL4A3Q01955 1670 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 H0Y858 1186 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 ZNF197O14709 1029 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 EIF3DO15371 548 aaKnown RBP eCLIP11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 MOSPD3O75425 235 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 PRPF6O94906 941 aaKnown RBP11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 GPC5P78333 572 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 SV2CQ496J9 727 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 IQCEQ6IPM2 695 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 TMC8Q8IU68 726 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 SYCP3Q8IZU3 236 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 CXorf38Q8TB03 319 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 ATOH1Q92858 354 aaPredicted RBP11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 DHX58Q96C10 678 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 BORCS6Q96GS4 357 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 ZNF512Q96ME7 567 aaPredicted RBP11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 ASAH2Q9NR71 780 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 HSFX1Q9UBD0 423 aa11.3□□□□□ -0.6
HMGXB3-205ENST00000514469 COL4A2P08572 1712 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 CYB561D2O14569 222 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 KIAA0391O15091 583 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 EXTL3O43909 919 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 RFX1P22670 979 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 HOXD13P35453 343 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PNPLA4P41247 253 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 STARD6P59095 220 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 ASIC1P78348 528 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 TFAMQ00059 246 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 AMPD3Q01432 767 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PFKPQ01813 784 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 EHHADHQ08426 723 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 DUSP4Q13115 394 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 FOXD4L6Q3SYB3 417 aaPredicted RBP11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 CYP4A22Q5TCH4 519 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 RESP18Q5W5W9 173 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 TANGO2Q6ICL3 276 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 ARMCX5Q6P1M9 558 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 FOXD4L3Q6VB84 417 aaPredicted RBP11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 STXBP4Q6ZWJ1 553 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 EPM2AIP1Q7L775 607 aaPredicted RBP11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 GPD1LQ8N335 351 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 C1orf127Q8N9H9 656 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 DTWD2Q8NBA8 298 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PJA1Q8NG27 643 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 HPS3Q969F9 1004 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 ASB16Q96NS5 453 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 C7orf25Q9BPX7 421 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PYM1Q9BRP8 204 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 DDX23Q9BUQ8 820 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 LRRC3Q9BY71 257 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PLA2G2FQ9BZM2 168 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 ZCWPW1Q9H0M4 648 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PCIF1Q9H4Z3 704 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 DLGAP2Q9P1A6 1054 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PCDHA7Q9UN72 937 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 MYO10Q9HD67 2058 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 UBE4BO95155 1302 aa11.29□□□□□ -0.6
HMGXB3-205ENST00000514469 PIEZO1Q92508 2521 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 GOLGA8IPA6NC78 632 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 GOLGA8JA6NMD2 632 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 KPNA7A9QM74 516 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 POLR2DO15514 142 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 ITGB3P05106 788 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 MYL4P12829 197 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 POLR2BP30876 1174 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 NBL1P41271 181 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 ALDH1A3P47895 512 aa11.28□□□□□ -0.6
HMGXB3-205ENST00000514469 ME1P48163 572 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms