RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 MTRF1LQ9UGC7 380 aaKnown RBP8.71□□□□□ -1.02
CPNE4-211ENST00000514439 PNMA3Q9UL41 463 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 TNFSF13BQ9Y275 285 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 CSDE1O75534 798 aaKnown RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 NUDT17P0C025 328 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 RALAP11233 206 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 MAN1A1P33908 653 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 GJC1P36383 396 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 EIF3BP55884 814 aaKnown RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 RPL7AP62424 266 aaKnown RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 GUCY1A3Q02108 690 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 KRT17Q04695 432 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 PPP1R7Q15435 360 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF792Q3KQV3 632 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 AGBL2Q5U5Z8 902 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 KATNAL2Q8IYT4 538 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 GPRC5AQ8NFJ5 357 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 GTF3C2Q8WUA4 911 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 TFAP2BQ92481 460 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 ART4Q93070 314 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 RNF25Q96BH1 459 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 SLC10A4Q96EP9 437 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 PPP1R16BQ96T49 567 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 NFKBIZQ9BYH8 718 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 DCLK3Q9C098 648 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 RPF1Q9H9Y2 349 aaKnown RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 PRMT7Q9NVM4 692 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 BCCIPQ9P287 314 aaKnown RBP eCLIP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 USTQ9Y2C2 406 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 R3HDM2Q9Y2K5 976 aaKnown RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 GPR25O00155 361 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 GH1P01241 217 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 SHBGP04278 402 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 CALB1P05937 261 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 NFICP08651 508 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF286BP0CG31 522 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 SSR1P43307 286 aaKnown RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 PHKA2P46019 1235 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 CCNA1P78396 465 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF252P-AS1Q0IIN9 211 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 KLF1Q13351 362 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF484Q5JVG2 852 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 DENND2CQ68D51 928 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 MAMDC4Q6UXC1 1216 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 LINC01465Q8N7H1 131 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 TMEM35BQ8NCS4 154 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 BCAS4Q8TDM0 211 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 MCEEQ96PE7 176 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 HEMGNQ9BXL5 484 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
CPNE4-211ENST00000514439 RSPH14Q9UHP6 348 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 SIX4Q9UIU6 781 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
CPNE4-211ENST00000514439 A0A087WZ62 844 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 TCRBV5S1A1TA0A578 114 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 TMEM191CA6NGB0 347 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 DCDC2CA8MYV0 355 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 PDHXO00330 501 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 MEFVO15553 781 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ZEB2O60315 1214 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 IL18RAPO95256 599 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 KRT19P08727 400 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 TCF4P15884 667 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 FGFR4P22455 802 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 CDH5P33151 784 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 LSP1P33241 339 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 MDH1P40925 334 aaKnown RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 RAP1GAPP47736 663 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 CALCOCO2Q13137 446 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 SLC29A2Q14542 456 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 AMHR2Q16671 573 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 FAM187BQ17R55 369 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 UBAP2Q5T6F2 1119 aaKnown RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 DNAJC24Q6P3W2 148 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ANKS1BQ7Z6G8 1248 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 WDTC1Q8N5D0 677 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ARFGAP2Q8N6H7 521 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 C1orf127Q8N9H9 656 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 EXD1Q8NHP7 514 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 PPTC7Q8NI37 304 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 AFG1LQ8WV93 481 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 FDXACB1Q9BRP7 624 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 FAM129AQ9BZQ8 928 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 SEMA4AQ9H3S1 761 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF408Q9H9D4 720 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 VTA1Q9NP79 307 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 KLHL11Q9NVR0 708 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ASIC3Q9UHC3 531 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 IP6K2Q9UHH9 426 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 PCDHGC3Q9UN70 934 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 NOVA2Q9UNW9 492 aaKnown RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 AKT3Q9Y243 479 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 LACTBL1A8MY62 500 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 TP73O15350 636 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 VTNP04004 478 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 STAG3L1P0CL83 205 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 EIF4BP23588 611 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms