RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 CTNND2Q9UQB3 1225 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 R3HCC1Q9Y3T6 440 aaKnown RBP8.97□□□□□ -0.97
CCL28-204ENST00000514421 BACE2Q9Y5Z0 518 aa8.97□□□□□ -0.97
CCL28-204ENST00000514421 RALGAPA2Q2PPJ7 1873 aa8.96□□□□□ -0.97
CCL28-204ENST00000514421 ARHGEF37A1IGU5 675 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 H3BQ06 376 aaPredicted RBP8.96□□□□□ -0.98
CCL28-204ENST00000514421 H7C4K7 107 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 I3L4J1 428 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 M0QZQ0 153 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 TNNC2P02585 160 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 NR3C1P04150 777 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 SKILP12757 684 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 TNNI1P19237 187 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 PNPLA4P41247 253 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 AARSP49588 968 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCL28-204ENST00000514421 AP3M2P53677 418 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 PMS1P54277 932 aaKnown RBP8.96□□□□□ -0.98
CCL28-204ENST00000514421 WNT7BP56706 349 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 TFF2Q03403 129 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 DLX2Q07687 328 aaPredicted RBP8.96□□□□□ -0.98
CCL28-204ENST00000514421 ADAM9Q13443 819 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 MRPL58Q14197 206 aaKnown RBP8.96□□□□□ -0.98
CCL28-204ENST00000514421 ARID5BQ14865 1188 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 PSMD6Q15008 389 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 KRT31Q15323 416 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 PSMD5Q16401 504 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 EDRF1Q3B7T1 1238 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 KLHL10Q6JEL2 608 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 ANKRD54Q6NXT1 300 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 LLGL2Q6P1M3 1020 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 PRSS55Q6UWB4 352 aaPredicted RBP8.96□□□□□ -0.98
CCL28-204ENST00000514421 ANKS3Q6ZW76 656 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 FILIP1Q7Z7B0 1213 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 TMEM139Q8IV31 216 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 WDR49Q8IV35 697 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 TMEM130Q8N3G9 435 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.96□□□□□ -0.98
CCL28-204ENST00000514421 HDAC7Q8WUI4 952 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 CCDC127Q96BQ5 260 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 BORCS6Q96GS4 357 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 ANKRD36BP1Q96IX9 119 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 MSLNLQ96KJ4 702 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 TSG101Q99816 390 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 CLSTN3Q9BQT9 956 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 CD207Q9UJ71 328 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 AGAP1Q9UPQ3 857 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 FRMD4BQ9Y2L6 1034 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 HCFC2Q9Y5Z7 792 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 NCOR1O75376 2440 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 PRUNE2Q8WUY3 3088 aa8.96□□□□□ -0.98
CCL28-204ENST00000514421 A0A0C4DFX4 3053 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 A0A1W2PQC6 194 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 GRXCR2A6NFK2 248 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 KCNJ18B7U540 433 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 PPEF2O14830 753 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 CETN3O15182 167 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 MAPK13O15264 365 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 OAZ2O95190 189 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 GLP2RO95838 553 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 TMEM191BP0C7N4 346 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 DLATP10515 647 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 BMP1P13497 986 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 EPCAMP16422 314 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 RPL17P18621 184 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 TYMPP19971 482 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 CDK11BP21127 795 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 NR2F2P24468 414 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 TKTP29401 623 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 OR1D2P34982 312 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 PSMC2P35998 433 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 TAF6P49848 677 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 CLCN4P51793 760 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 STX17P56962 302 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 RBM10P98175 930 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 LRRC63Q05C16 580 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 RAB33AQ14088 237 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 KCNJ12Q14500 433 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 ZCWPW2Q504Y3 356 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 CEP135Q66GS9 1140 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 PTCRAQ6ISU1 281 aaPredicted RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 LILRA6Q6PI73 481 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 SYCE2Q6PIF2 218 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 ELMSAN1Q6PJG2 1045 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 TRAPPC11Q7Z392 1133 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 USP37Q86T82 979 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 PALB2Q86YC2 1186 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 ZC3H3Q8IXZ2 948 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 C1orf127Q8N9H9 656 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 TC2NQ8N9U0 490 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 VN1R2Q8NFZ6 395 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 OR5B17Q8NGF7 314 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 PARD3BQ8TEW8 1205 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 SENP8Q96LD8 212 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 PANX2Q96RD6 677 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 POP1Q99575 1024 aaKnown RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 OXCT2Q9BYC2 517 aaPredicted RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 PLEKHA4Q9H4M7 779 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms