RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 DCLK1O15075 740 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 CAPN5O15484 640 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 MYL4P12829 197 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 ATF2P15336 505 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 KPNA1P52294 538 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 EPHA5P54756 1037 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 MLLT6P55198 1093 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 ARPP19P56211 112 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 POU5F1BQ06416 359 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 SOX4Q06945 474 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 TNK2Q07912 1038 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 NCBP1Q09161 790 aaKnown RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 TFDP1Q14186 410 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 EPHA7Q15375 998 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 INF2Q27J81 1249 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 PLK5Q496M5 336 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 MOXD1Q6UVY6 613 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 CHFRQ96EP1 664 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 ZC3H10Q96K80 434 aaKnown RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 AIFM3Q96NN9 605 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 PPP1R10Q96QC0 940 aaKnown RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 MKNK1Q9BUB5 465 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 NFKBIZQ9BYH8 718 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 KRTAP4-6Q9BYQ5 205 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 POLR3FQ9H1D9 316 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 SLKQ9H2G2 1235 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 NCOA5Q9HCD5 579 aaKnown RBP9.99□□□□□ -0.81
SH3D19-209ENST00000514013 VPS45Q9NRW7 570 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 PCDHA4Q9UN74 947 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 PCDHGA5Q9Y5G8 931 aa9.99□□□□□ -0.81
SH3D19-209ENST00000514013 SPAG17Q6Q759 2223 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 H3BM21 787 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 ZNF197O14709 1029 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 CHADO15335 359 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 HYAL3O43820 417 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-209ENST00000514013 VNN2O95498 520 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 NLRP5P59047 1200 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 USP46P62068 366 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 UPP1Q16831 310 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 DGKKQ5KSL6 1271 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 ANKS3Q6ZW76 656 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 EXOC8Q8IYI6 725 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 EHBP1Q8NDI1 1231 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 CSGALNACT1Q8TDX6 532 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 BRF1Q92994 677 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 LRRC3Q9BY71 257 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 RNF26Q9BY78 433 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-209ENST00000514013 DUSP15Q9H1R2 295 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-209ENST00000514013 C8orf33Q9H7E9 229 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-209ENST00000514013 FBXL5Q9UKA1 691 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 KLK13Q9UKR3 277 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 GDAQ9Y2T3 454 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 WASF2Q9Y6W5 498 aa9.98□□□□□ -0.81
SH3D19-209ENST00000514013 CCDC196A0A1B0GTZ2 297 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 PATE3B3GLJ2 98 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 CDX4O14627 284 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-209ENST00000514013 SIAH2O43255 324 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 DKC1O60832 514 aaKnown RBP eCLIP9.97□□□□□ -0.81
SH3D19-209ENST00000514013 SLITRK3O94933 977 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 CAPNS1P04632 268 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 CCDC192P0DO97 292 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 IFNAR1P17181 557 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 TWF1Q12792 350 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 CYP4A22Q5TCH4 519 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 CDCA2Q69YH5 1023 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-209ENST00000514013 NCAPH2Q6IBW4 605 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 FSTL4Q6MZW2 842 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 Q6ZUG5 572 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 OTUD6AQ7L8S5 288 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 RALGPS2Q86X27 583 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-209ENST00000514013 TMC8Q8IU68 726 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 TPH2Q8IWU9 490 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 BLIDQ8IZY5 108 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 TMEM130Q8N3G9 435 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 DEFB124Q8NES8 71 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 BSNDQ8WZ55 320 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 MSANTD3Q96H12 275 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 HHIPQ96QV1 700 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 DNAJC25Q9H1X3 360 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 CRISPLD1Q9H336 500 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 FZD8Q9H461 694 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 ZSWIM4Q9H7M6 989 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 ARID2Q68CP9 1835 aa9.97□□□□□ -0.81
SH3D19-209ENST00000514013 APC2O95996 2303 aa9.96□□□□□ -0.81
SH3D19-209ENST00000514013 CCDC163A0A0D9SF12 145 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 BCLAF3A2AJT9 711 aaKnown RBP9.96□□□□□ -0.82
SH3D19-209ENST00000514013 LRRIQ4A6NIV6 560 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 PRAMEF12O95522 483 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 JUNDP17535 347 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 ELF1P32519 619 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 RBM25P49756 843 aaKnown RBP9.96□□□□□ -0.82
SH3D19-209ENST00000514013 RARRES1P49788 294 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 AKAP17AQ02040 695 aaKnown RBP9.96□□□□□ -0.82
SH3D19-209ENST00000514013 CREB5Q02930 508 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 MRPL58Q14197 206 aaKnown RBP9.96□□□□□ -0.82
SH3D19-209ENST00000514013 TSGA10IPQ3SY00 556 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 NAIF1Q69YI7 327 aaPredicted RBP9.96□□□□□ -0.82
SH3D19-209ENST00000514013 C19orf48Q6RUI8 117 aa9.96□□□□□ -0.82
SH3D19-209ENST00000514013 MAEAQ7L5Y9 396 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms