RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 ORC1Q13415 861 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 WDR72Q3MJ13 1102 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 SV2CQ496J9 727 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 USP37Q86T82 979 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 RBM23Q86U06 439 aaKnown RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 DEFB123Q8N688 67 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 LRRC52Q8N7C0 313 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 FBXL13Q8NEE6 735 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 MICAL1Q8TDZ2 1067 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 KAT5Q92993 513 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 ARID3AQ99856 593 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 LPIN3Q9BQK8 851 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 INTS2Q9H0H0 1204 aaKnown RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 NDST4Q9H3R1 872 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 RAB20Q9NX57 234 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 GCNT4Q9P109 453 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 AJAP1Q9UKB5 411 aaPredicted RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
HTT-213ENST00000513806 R3HCC1Q9Y3T6 440 aaKnown RBP12.17□□□□□ -0.46
HTT-213ENST00000513806 PTPRDP23468 1912 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.16□□□□□ -0.46
HTT-213ENST00000513806 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 M0QZQ0 153 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 FSCN2O14926 492 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 STX10O60499 249 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 ASS1P00966 412 aaKnown RBP12.16□□□□□ -0.46
HTT-213ENST00000513806 CALCAP01258 141 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 WEE2P0C1S8 567 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 CTSAP10619 480 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 FGFR3P22607 806 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 ACAT1P24752 427 aaKnown RBP12.16□□□□□ -0.46
HTT-213ENST00000513806 GLUD2P49448 558 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 ARPP19P56211 112 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 FANCCQ00597 558 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 ENPEPQ07075 957 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 KCNMA1Q12791 1236 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 MYO1EQ12965 1108 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 PTPN14Q15678 1187 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 SOWAHAQ2M3V2 549 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 ZNF667Q5HYK9 610 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 KIAA0319Q5VV43 1072 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 KIAA1841Q6NSI8 718 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 PDCL2Q8N4E4 241 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 LMO3Q8TAP4 145 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 LNX1Q8TBB1 728 aaPredicted RBP12.16□□□□□ -0.46
HTT-213ENST00000513806 KBTBD7Q8WVZ9 684 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 CDX2Q99626 313 aaPredicted RBP12.16□□□□□ -0.46
HTT-213ENST00000513806 RTP3Q9BQQ7 232 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 TTPALQ9BTX7 342 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 CHST7Q9NS84 486 aa12.16□□□□□ -0.46
HTT-213ENST00000513806 TMEM265A0A087WTH1 108 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 AP5Z1O43299 807 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 LILRB3O75022 631 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 URODP06132 367 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 ODC1P11926 461 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 CD58P19256 250 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 LMO2P25791 158 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 PNPLA4P41247 253 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 ASPAP45381 313 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 TNNC1P63316 161 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 DSG1Q02413 1049 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 CCDC85BQ15834 202 aaPredicted RBP12.15□□□□□ -0.46
HTT-213ENST00000513806 PSMD5Q16401 504 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 SGSM1Q2NKQ1 1148 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.15□□□□□ -0.46
HTT-213ENST00000513806 RRAGAQ7L523 313 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 OR10T2Q8NGX3 314 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 FEZF2Q8TBJ5 459 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 PPM1EQ8WY54 764 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 MRPL38Q96DV4 380 aaKnown RBP12.15□□□□□ -0.46
HTT-213ENST00000513806 LSM14BQ9BX40 385 aaKnown RBP12.15□□□□□ -0.46
HTT-213ENST00000513806 DPEP3Q9H4B8 488 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 IGFLR1Q9H665 355 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 SIX2Q9NPC8 291 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 HMGXB4Q9UGU5 601 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 PUF60Q9UHX1 559 aaKnown RBP12.15□□□□□ -0.46
HTT-213ENST00000513806 LZTS1Q9Y250 596 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 COQ4Q9Y3A0 265 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 MTCH2Q9Y6C9 303 aa12.15□□□□□ -0.46
HTT-213ENST00000513806 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 LGALS16A8MUM7 142 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 TRAPPC3O43617 180 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 HUS1O60921 280 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 N4BP1O75113 896 aaKnown RBP12.14□□□□□ -0.47
HTT-213ENST00000513806 ATP2C2O75185 946 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 SERPINC1P01008 464 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 CNPP09543 421 aaKnown RBP12.14□□□□□ -0.47
HTT-213ENST00000513806 PDGFRBP09619 1106 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 PON1P27169 355 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 ATICP31939 592 aa12.14□□□□□ -0.47
HTT-213ENST00000513806 PSMC1P62191 440 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms