RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 CALM3P0DP25 149 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 RPL6Q02878 288 aaKnown RBP13.07□□□□□ -0.32
SFXN1-210ENST00000513725 PLD1Q13393 1074 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 CRY1Q16526 586 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 PLEKHG6Q3KR16 790 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 PRR16Q569H4 304 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 SLC27A1Q6PCB7 646 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 TMC8Q8IU68 726 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 ZNF654Q8IZM8 581 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 CD101Q93033 1021 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 LRRC3Q9BY71 257 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 ZDHHC5Q9C0B5 715 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 GLT8D2Q9H1C3 349 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.32
SFXN1-210ENST00000513725 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
SFXN1-210ENST00000513725 AK5Q9Y6K8 562 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 KIAA1549LQ6ZVL6 1849 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 PTPRDP23468 1912 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 A0A1W2PQD8 194 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 INO80B-WBP1J3KQ70 363 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 PTGESO14684 152 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 STBD1O95210 358 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 ARF4P18085 180 aaPredicted RBP13.06□□□□□ -0.32
SFXN1-210ENST00000513725 CYP4A11Q02928 519 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 ZNF33AQ06730 810 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 MAP7D1Q3KQU3 841 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 TRIM68Q6AZZ1 485 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 RDM1Q8NG50 284 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 EZH1Q92800 747 aaPredicted RBP13.06□□□□□ -0.32
SFXN1-210ENST00000513725 POLR3CQ9BUI4 534 aaPredicted RBP13.06□□□□□ -0.32
SFXN1-210ENST00000513725 FAM117AQ9C073 453 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 MMP17Q9ULZ9 603 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 TBX20Q9UMR3 447 aa13.06□□□□□ -0.32
SFXN1-210ENST00000513725 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 I3L4J1 428 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 GAS7O60861 476 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 GJA4P35212 333 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
SFXN1-210ENST00000513725 EPHB3P54753 998 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 NAB2Q15742 525 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 NAIF1Q69YI7 327 aaPredicted RBP13.05□□□□□ -0.32
SFXN1-210ENST00000513725 WWC2Q6AWC2 1192 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 SLC36A4Q6YBV0 504 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 RALYLQ86SE5 291 aaKnown RBP13.05□□□□□ -0.32
SFXN1-210ENST00000513725 TMPRSS12Q86WS5 348 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 DEFB119Q8N690 84 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 BAHD1Q8TBE0 780 aaPredicted RBP13.05□□□□□ -0.32
SFXN1-210ENST00000513725 USP33Q8TEY7 942 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 TCP11Q8WWU5 503 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 CRYGNQ8WXF5 182 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 FGF11Q92914 225 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
SFXN1-210ENST00000513725 TASP1Q9H6P5 420 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 FBXL5Q9UKA1 691 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 YIPF1Q9Y548 306 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 FLNCQ14315 2725 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 MYO16Q9Y6X6 1858 aa13.05□□□□□ -0.32
SFXN1-210ENST00000513725 PLXND1Q9Y4D7 1925 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 PTENP60484 403 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 CCDC173Q0VFZ6 552 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 KCNH2Q12809 1159 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 PLA2G4FQ68DD2 849 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 CC2D1AQ6P1N0 951 aaPredicted RBP13.04□□□□□ -0.32
SFXN1-210ENST00000513725 ANO5Q75V66 913 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 MIER3Q7Z3K6 550 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 SPACA3Q8IXA5 215 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 PGBD3Q8N328 593 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 CPA6Q8N4T0 437 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 RHBDD1Q8TEB9 315 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 RIT2Q99578 217 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 UNC45AQ9H3U1 944 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 SUSD2Q9UGT4 822 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 C2CD3Q4AC94 2353 aa13.04□□□□□ -0.32
SFXN1-210ENST00000513725 CEP192Q8TEP8 1941 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 KNTC1P50748 2209 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 AHCTF1Q8WYP5 2266 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 SYN3O14994 580 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 ZNF883P0CG24 379 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 ARSAP15289 507 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 GNSP15586 552 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 SDSP20132 328 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 IGFBP6P24592 240 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-210ENST00000513725 GABRR2P28476 465 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 BRCC3P46736 316 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 CLCNKBP51801 687 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 UCNP55089 124 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 SEC13P55735 322 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 GRIK2Q13002 908 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 UBAP2LQ14157 1087 aaKnown RBP13.03□□□□□ -0.32
SFXN1-210ENST00000513725 PDGFRLQ15198 375 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 AMHR2Q16671 573 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
SFXN1-210ENST00000513725 LRCH2Q5VUJ6 765 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms