RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 DNAJB7Q7Z6W7 309 aaPredicted RBP12.27□□□□□ -0.45
RNF4-218ENST00000513284 ZBTB8OSQ8IWT0 167 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 FAM200AQ8TCP9 573 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 ADPGKQ9BRR6 497 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
RNF4-218ENST00000513284 KIFC3Q9BVG8 833 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 SMG9Q9H0W8 520 aaKnown RBP12.27□□□□□ -0.45
RNF4-218ENST00000513284 TMEM9BQ9NQ34 198 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 OBP2AQ9NY56 170 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 PCDHA12Q9UN75 941 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 ANTXRLA6NF34 631 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 KHNYNO15037 678 aaKnown RBP12.26□□□□□ -0.45
RNF4-218ENST00000513284 MARCH6O60337 910 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 ATG13O75143 517 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 KCNE1P15382 129 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 ATP2B1P20020 1258 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 WEE1P30291 646 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 GALK1P51570 392 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
RNF4-218ENST00000513284 DCAF4L1Q3SXM0 396 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 GPR158Q5T848 1215 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 PIK3AP1Q6ZUJ8 805 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 PROSER1Q86XN7 944 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 SLFN12Q8IYM2 578 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 TRIM22Q8IYM9 498 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 TTC9BQ8N6N2 239 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 RIN3Q8TB24 985 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 BPIFB1Q8TDL5 484 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 PGLYRP2Q96PD5 576 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
RNF4-218ENST00000513284 SLC46A2Q9BY10 475 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 C2orf40Q9H1Z8 148 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 ATXN3LQ9H3M9 355 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 PTPRHQ9HD43 1115 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 EBF1Q9UH73 591 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 SLC27A5Q9Y2P5 690 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 CACNA1EQ15878 2313 aa12.26□□□□□ -0.45
RNF4-218ENST00000513284 SPAARA0A1B0GVQ0 90 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 SOAT2O75908 522 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 REC8O95072 547 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 OAZ2O95190 189 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 BAG4O95429 457 aaKnown RBP12.25□□□□□ -0.45
RNF4-218ENST00000513284 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.456e-8■□□□□ 9.9
RNF4-218ENST00000513284 RPL9P32969 192 aaKnown RBP12.25□□□□□ -0.45
RNF4-218ENST00000513284 GRM5P41594 1212 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 OSTNP61366 133 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 FAM193AP78312 1265 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 GRSF1Q12849 480 aaKnown RBP eCLIP12.25□□□□□ -0.45
RNF4-218ENST00000513284 RUNX3Q13761 415 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 ELF2Q15723 593 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 ATF7IP2Q5U623 682 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 PMS2CLQ68D20 193 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 TRIM68Q6AZZ1 485 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 CENPPQ6IPU0 288 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 ZNF280DQ6N043 979 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 HAUS6Q7Z4H7 955 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 PDZD3Q86UT5 571 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 CATSPER3Q86XQ3 398 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 FAM177A1Q8N128 213 aaPredicted RBP12.25□□□□□ -0.45
RNF4-218ENST00000513284 MCPH1Q8NEM0 835 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 TTC12Q9H892 705 aaPredicted RBP12.25□□□□□ -0.45
RNF4-218ENST00000513284 IL21Q9HBE4 155 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 TNFSF13BQ9Y275 285 aa12.25□□□□□ -0.45
RNF4-218ENST00000513284 TIMM13Q9Y5L4 95 aaPredicted RBP12.25□□□□□ -0.45
RNF4-218ENST00000513284 HELZ2Q9BYK8 2649 aaKnown RBP12.25□□□□□ -0.45
RNF4-218ENST00000513284 DPYSL4O14531 572 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 ABLIM1O14639 778 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 MED24O75448 989 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 CPB1P15086 417 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 CYP11B2P19099 503 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 BCKDHBP21953 392 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 GABRR2P28476 465 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 NAMPTP43490 491 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 GPR17Q13304 367 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
RNF4-218ENST00000513284 SYT13Q7L8C5 426 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 CHCHD4Q8N4Q1 142 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 ATAD1Q8NBU5 361 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 APPL2Q8NEU8 664 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 PSMG2Q969U7 264 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 MTMR9Q96QG7 549 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 ACO2Q99798 780 aaKnown RBP12.24□□□□□ -0.45
RNF4-218ENST00000513284 CDT1Q9H211 546 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 EBF3Q9H4W6 596 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 TASP1Q9H6P5 420 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 TPCN1Q9ULQ1 816 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 CCL26Q9Y258 94 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 NUB1Q9Y5A7 615 aa12.24□□□□□ -0.45
RNF4-218ENST00000513284 NUP210Q8TEM1 1887 aaPredicted RBP12.23□□□□□ -0.45
RNF4-218ENST00000513284 M0QZQ0 153 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 ARSAP15289 507 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms