RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RNF168Q8IYW5 571 aaPredicted RBP17.72■□□□□ 0.43
HMGCL-209ENST00000513148 PLCD3Q8N3E9 789 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 HERC2P3Q9BVR0 1158 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 UBXN6Q9BZV1 441 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 ARGLU1Q9NWB6 273 aaPredicted RBP17.72■□□□□ 0.43
HMGCL-209ENST00000513148 GEMIN8Q9NWZ8 242 aaKnown RBP17.72■□□□□ 0.43
HMGCL-209ENST00000513148 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
HMGCL-209ENST00000513148 ERICH4A6NGS2 130 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 HIDE1A8MVS5 230 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 SPTLC1O15269 473 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 TRAPPC3O43617 180 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 ZRANB2O95218 330 aaKnown RBP eCLIP17.72■□□□□ 0.43
HMGCL-209ENST00000513148 EFEMP2O95967 443 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 URODP06132 367 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
HMGCL-209ENST00000513148 GLUD2P49448 558 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 TAF6P49848 677 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 CLDN10P78369 228 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 RBP5P82980 135 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 PPP3CAQ08209 521 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 USP41Q3LFD5 358 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 RTP2Q5QGT7 225 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 CCAR2Q8N163 923 aaKnown RBP17.72■□□□□ 0.43
HMGCL-209ENST00000513148 CXorf38Q8TB03 319 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 ZNF560Q96MR9 790 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 RASSF4Q9H2L5 321 aa17.72■□□□□ 0.43
HMGCL-209ENST00000513148 FGFR1OPO95684 399 aaKnown RBP17.71■□□□□ 0.43
HMGCL-209ENST00000513148 CTSAP10619 480 aa17.71■□□□□ 0.43
HMGCL-209ENST00000513148 ZNF165P49910 485 aa17.71■□□□□ 0.43
HMGCL-209ENST00000513148 ELAVL2Q12926 359 aaKnown RBP17.71■□□□□ 0.43
HMGCL-209ENST00000513148 SMC1AQ14683 1233 aaKnown RBP17.71■□□□□ 0.43
HMGCL-209ENST00000513148 CCDC85BQ15834 202 aaPredicted RBP17.71■□□□□ 0.43
HMGCL-209ENST00000513148 DSTYKQ6XUX3 929 aa17.71■□□□□ 0.43
HMGCL-209ENST00000513148 ADGRD2Q7Z7M1 963 aa17.71■□□□□ 0.43
HMGCL-209ENST00000513148 RBM23Q86U06 439 aaKnown RBP17.71■□□□□ 0.43
HMGCL-209ENST00000513148 PPM1EQ8WY54 764 aa17.71■□□□□ 0.43
HMGCL-209ENST00000513148 RIN2Q8WYP3 895 aaPredicted RBP17.71■□□□□ 0.43
HMGCL-209ENST00000513148 CWC15Q9P013 229 aaKnown RBP17.71■□□□□ 0.43
HMGCL-209ENST00000513148 FSCN2O14926 492 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 CXCL14O95715 111 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 CST3P01034 146 aaPredicted RBP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 PNMA6AP0CW24 399 aaPredicted RBP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 TRPC3Q13507 836 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 PRSS55Q6UWB4 352 aaPredicted RBP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 SV2AQ7L0J3 742 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 FRMD5Q7Z6J6 570 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 CNOT6LQ96LI5 555 aaKnown RBP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 TTPALQ9BTX7 342 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 METTL14Q9HCE5 456 aaKnown RBP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 MRPL17Q9NRX2 175 aaKnown RBP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 PSD3Q9NYI0 1048 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 STK39Q9UEW8 545 aa17.71■□□□□ 0.42
HMGCL-209ENST00000513148 TIMM13Q9Y5L4 95 aaPredicted RBP17.71■□□□□ 0.42
HMGCL-209ENST00000513148 IKBKBO14920 756 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 C4BPAP04003 597 aaKnown RBP17.7■□□□□ 0.42
HMGCL-209ENST00000513148 SKILP12757 684 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 AP3M2P53677 418 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 SV2CQ496J9 727 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 CT47A1Q5JQC4 288 aaPredicted RBP17.7■□□□□ 0.42
HMGCL-209ENST00000513148 GLYCTKQ8IVS8 523 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 SUSD3Q96L08 255 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 NSUN3Q9H649 340 aaKnown RBP17.7■□□□□ 0.42
HMGCL-209ENST00000513148 NGRNQ9NPE2 291 aaKnown RBP17.7■□□□□ 0.42
HMGCL-209ENST00000513148 CHST7Q9NS84 486 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 LMCD1Q9NZU5 365 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 IMPACTQ9P2X3 320 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 NFE2L3Q9Y4A8 694 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 TSC2P49815 1807 aa17.7■□□□□ 0.42
HMGCL-209ENST00000513148 C2orf71A6NGG8 1288 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 KPNA7A9QM74 516 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 PER2O15055 1255 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 GNA14O95837 355 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 PNPLA4P41247 253 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 PIK3CAP42336 1068 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 AARSP49588 968 aaKnown RBP eCLIP17.69■□□□□ 0.42
HMGCL-209ENST00000513148 MYL6P60660 151 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 DSG1Q02413 1049 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 MYO1EQ12965 1108 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 ZACNQ401N2 412 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 TCEAL5Q5H9L2 206 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 LRRC52Q8N7C0 313 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 SLC35C1Q96A29 364 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 HPDLQ96IR7 371 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 SENP8Q96LD8 212 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 COL6A3P12111 3177 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 PRUNE2Q8WUY3 3088 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 VNN1O95497 513 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 RPL17P18621 184 aaKnown RBP17.69■□□□□ 0.42
HMGCL-209ENST00000513148 FGFR3P22607 806 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 PLA2G4AP47712 749 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 MXI1P50539 228 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 NCOA4Q13772 614 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 IRF2BP1Q8IU81 584 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 MRPL43Q8N983 215 aaKnown RBP17.69■□□□□ 0.42
HMGCL-209ENST00000513148 ENOX1Q8TC92 643 aaKnown RBP17.69■□□□□ 0.42
HMGCL-209ENST00000513148 IGFLR1Q9H665 355 aa17.69■□□□□ 0.42
HMGCL-209ENST00000513148 TMEM8AQ9HCN3 771 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms