RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 XKR3Q5GH77 459 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 OTUD7AQ8TE49 926 aaPredicted RBP10.39□□□□□ -0.75
CLCN3-208ENST00000512813 TMEM176AQ96HP8 235 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 CPB2Q96IY4 423 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 EBF3Q9H4W6 596 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 PRDM16Q9HAZ2 1276 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 AK5Q9Y6K8 562 aa10.39□□□□□ -0.75
CLCN3-208ENST00000512813 CLEC18AA5D8T8 446 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 PTGESO14684 152 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 FLRT2O43155 660 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 STBD1O95210 358 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
CLCN3-208ENST00000512813 SRGAP2CP0DJJ0 459 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 KRT10P13645 584 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 HNRNPLP14866 589 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLCN3-208ENST00000512813 MFAP1P55081 439 aaKnown RBP10.38□□□□□ -0.75
CLCN3-208ENST00000512813 RPL6Q02878 288 aaKnown RBP10.38□□□□□ -0.75
CLCN3-208ENST00000512813 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 PTPRNQ16849 979 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 IMMTQ16891 758 aaKnown RBP10.38□□□□□ -0.75
CLCN3-208ENST00000512813 PLEKHG6Q3KR16 790 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 TRIM68Q6AZZ1 485 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 CLEC18BQ6UXF7 455 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 ATG14Q6ZNE5 492 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 DBX2Q6ZNG2 339 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 TTC30AQ86WT1 665 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 CLEC18CQ8NCF0 446 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 SNRNP27Q8WVK2 155 aaKnown RBP10.38□□□□□ -0.75
CLCN3-208ENST00000512813 CRYGNQ8WXF5 182 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 CD101Q93033 1021 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 PNMA5Q96PV4 448 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 MAP3K14Q99558 947 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 SH2D3AQ9BRG2 576 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 NRSN2Q9GZP1 204 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 PARP2Q9UGN5 583 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 SUSD2Q9UGT4 822 aa10.38□□□□□ -0.75
CLCN3-208ENST00000512813 GOLGA8CPA6NN73 597 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 TRAPPC3O43617 180 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 THP07101 528 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 POU3F2P20265 443 aaPredicted RBP10.37□□□□□ -0.75
CLCN3-208ENST00000512813 MX1P20591 662 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 IGFBP6P24592 240 aaPredicted RBP10.37□□□□□ -0.75
CLCN3-208ENST00000512813 GJA4P35212 333 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 ARPP19P56211 112 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 SCRN1Q12765 414 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 MYO1EQ12965 1108 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 AP3B2Q13367 1082 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 KRTAP21-3Q3LHN1 58 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 GPR158Q5T848 1215 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 ARHGAP40Q5TG30 622 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 DHRS13Q6UX07 377 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 TMEM92Q6UXU6 159 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 SLC36A4Q6YBV0 504 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 GAREM2Q75VX8 874 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 CATIPQ7Z7H3 387 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 ERICH1Q86X53 443 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 PRPF31Q8WWY3 499 aaKnown RBP10.37□□□□□ -0.75
CLCN3-208ENST00000512813 PSPC1Q8WXF1 523 aaKnown RBP10.37□□□□□ -0.75
CLCN3-208ENST00000512813 LIN37Q96GY3 246 aaPredicted RBP10.37□□□□□ -0.75
CLCN3-208ENST00000512813 PSMG3-AS1Q96PY0 264 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 FAM124BQ9H5Z6 455 aaPredicted RBP10.37□□□□□ -0.75
CLCN3-208ENST00000512813 DCTPP1Q9H773 170 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 CPNE5Q9HCH3 593 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 RIC8AQ9NPQ8 531 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 AFF4Q9UHB7 1163 aaKnown RBP10.37□□□□□ -0.75
CLCN3-208ENST00000512813 YIPF1Q9Y548 306 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 PCDHGB2Q9Y5G2 931 aa10.37□□□□□ -0.75
CLCN3-208ENST00000512813 ERICH2A1L162 156 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 I3L4J1 428 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 IFIT3O14879 490 aaKnown RBP10.36□□□□□ -0.75
CLCN3-208ENST00000512813 TNFSF14O43557 240 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 B3GAT3O94766 335 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 PLEKHA8P1O95397 391 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 CYP3A4P08684 503 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 ARSAP15289 507 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 SFNP31947 248 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 HNF1BP35680 557 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 JAK3P52333 1124 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 NCBP1Q09161 790 aaKnown RBP10.36□□□□□ -0.75
CLCN3-208ENST00000512813 LAMTOR4Q0VGL1 99 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 NFATC3Q12968 1075 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 PLD1Q13393 1074 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 ARHGAP15Q53QZ3 475 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 C6orf132Q5T0Z8 1188 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 CD300LGQ6UXG3 332 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 SLC41A1Q8IVJ1 513 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-208ENST00000512813 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 LGMNQ99538 433 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 DNAJC25Q9H1X3 360 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 ATXN3LQ9H3M9 355 aa10.36□□□□□ -0.75
CLCN3-208ENST00000512813 BCCIPQ9P287 314 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLCN3-208ENST00000512813 CABIN1Q9Y6J0 2220 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 NPTXRO95502 500 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 FGF19O95750 216 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 MYF5P13349 255 aa10.35□□□□□ -0.75
CLCN3-208ENST00000512813 ARF4P18085 180 aaPredicted RBP10.35□□□□□ -0.75
CLCN3-208ENST00000512813 ACTN2P35609 894 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms