RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ENPEPQ07075 957 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 FZD5Q13467 585 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 ARID5BQ14865 1188 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 SF3A2Q15428 464 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 FIGNQ5HY92 759 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 SPECC1LQ69YQ0 1117 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 TWF2Q6IBS0 349 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 RSPO2Q6UXX9 243 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 GRASPQ7Z6J2 395 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 FAM193BQ96PV7 902 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 RPS6KC1Q96S38 1066 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 MAP7D2Q96T17 732 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 NELL2Q99435 816 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 SH2D3AQ9BRG2 576 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 SRRTQ9BXP5 876 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 RHOBTB2Q9BYZ6 727 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 DHX33Q9H6R0 707 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 KCND1Q9NSA2 647 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 RXFP3Q9NSD7 469 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 GABBR1Q9UBS5 961 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 DPP7Q9UHL4 492 aa11.38□□□□□ -0.59
PDLIM5-217ENST00000512274 GREB1Q4ZG55 1949 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 NPHP3-ACAD11A0A0J9YXS1 232 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 TRIM49BA6NDI0 452 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 ESPNB1AK53 854 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 NRP1O14786 923 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 TM4SF5O14894 197 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 ZBTB39O15060 712 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 MAPK13O15264 365 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 HRO43593 1189 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 CALUO43852 315 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 HIP1RO75146 1068 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 KCNK5O95279 499 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 OATP04181 439 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 PTMAP06454 111 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 TDGF1P13385 188 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 DARSP14868 501 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 FECHP22830 423 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 RPL13P26373 211 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 DNM2P50570 870 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 NCKAP1LP55160 1127 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 PFKPQ01813 784 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 FOXC1Q12948 553 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 KDF1Q8NAX2 398 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 CCDC112Q8NEF3 446 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 ERGIC2Q96RQ1 377 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 PRKD2Q9BZL6 878 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 TMEM206Q9H813 350 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 HEBP1Q9NRV9 189 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 NRBP2Q9NSY0 501 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 DMAC2Q9NW81 257 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 CDH7Q9ULB5 785 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 MAPK8IP1Q9UQF2 711 aa11.37□□□□□ -0.59
PDLIM5-217ENST00000512274 PHLPP2Q6ZVD8 1323 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 IGKV6-21A0A0C4DH24 114 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 CARNS1A5YM72 827 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 CHURC1-FNTBB4DL54 471 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 TGM5O43548 720 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 ZNF500O60304 480 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 SOD2P04179 222 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 TPM2P07951 284 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 HOXD13P35453 343 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 FNTBP49356 437 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 GPC3P51654 580 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 AFF1P51825 1210 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 MAN2A1Q16706 1144 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 XKR9Q5GH70 373 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 HEATR6Q6AI08 1181 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 PSAPL1Q6NUJ1 521 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 ZNF852Q6ZMS4 543 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 MTSS1LQ765P7 747 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 CCDC186Q7Z3E2 898 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 LRRC8AQ8IWT6 810 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 MYCT1Q8N699 235 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 C12orf50Q8NA57 414 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 NLRP7Q8WX94 980 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 HPS3Q969F9 1004 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 CCDC51Q96ER9 411 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 CEP170P1Q96L14 293 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 B3GALT6Q96L58 329 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 CNOT6LQ96LI5 555 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 HERC2P3Q9BVR0 1158 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 FGFBP2Q9BYJ0 223 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 MRPL44Q9H9J2 332 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 METTL14Q9HCE5 456 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 FAM105AQ9NUU6 356 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 ZDHHC7Q9NXF8 308 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 PRG3Q9Y2Y8 225 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 ZFP37Q9Y6Q3 630 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 ZMYM2Q9UBW7 1377 aa11.36□□□□□ -0.59
PDLIM5-217ENST00000512274 PKD1L2Q7Z442 2459 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 N4BP3O15049 544 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 AXIN1O15169 862 aa11.35□□□□□ -0.59
PDLIM5-217ENST00000512274 CETN3O15182 167 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms