RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 JUNP05412 331 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PDE6AP16499 860 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 IFNA8P32881 189 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 BMPR1AP36894 532 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 SATB1Q01826 763 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 LAMB3Q13751 1172 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 XKR4Q5GH76 650 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 UGT2A3Q6UWM9 527 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 Q6ZUG5 572 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 B4GALNT4Q76KP1 1039 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TMTC1Q8IUR5 882 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 SMYD4Q8IYR2 804 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 RNF169Q8NCN4 708 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NGDNQ8NEJ9 315 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 GIMAP7Q8NHV1 300 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 AFAP1L1Q8TED9 768 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 C10orf82Q8WW14 230 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TAF4BQ92750 862 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FBXW7Q969H0 707 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZBTB9Q96C00 473 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAF2Q96CS3 445 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 SMC6Q96SB8 1091 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NAT10Q9H0A0 1025 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NUP62CLQ9H1M0 184 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FOXP1Q9H334 677 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 EHMT1Q9H9B1 1298 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 HELLSQ9NRZ9 838 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 GKN1Q9NS71 199 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ANKRD10Q9NXR5 420 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM13BQ9NYF5 915 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ODF2LQ9ULJ1 636 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TPX2Q9ULW0 747 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TNCP24821 2201 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARHGEF17Q96PE2 2063 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 RYR3Q15413 4870 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF532Q9HCE3 1301 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NBEAL1Q6ZS30 2694 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ELL2O00472 640 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PGLSO95336 258 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 MYCNP04198 464 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FYNP06241 537 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TPBGLP0DKB5 382 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NFKBIAP25963 317 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PMLP29590 882 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CDH5P33151 784 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ALDH3B2P48448 385 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PTPN5P54829 565 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CASP8Q14790 479 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 SETDB1Q15047 1291 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TAF11Q15544 211 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 STX1AQ16623 288 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 AMHR2Q16671 573 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARHGAP29Q52LW3 1261 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 VASNQ6EMK4 673 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NFXL1Q6ZNB6 911 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TAOK1Q7L7X3 1001 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ECHDC2Q86YB7 292 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 GSPT2Q8IYD1 628 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 MPNDQ8N594 471 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PDCD7Q8N8D1 485 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TMEM102Q8N9M5 508 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FANCBQ8NB91 859 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZBTB44Q8NCP5 570 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRPV1Q8NER1 839 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACVR1CQ8NER5 493 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CFAP61Q8NHU2 1237 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 VTI1AQ96AJ9 217 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 DMRTA2Q96SC8 542 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NTPCRQ9BSD7 190 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 LRRC1Q9BTT6 524 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FSD1Q9BTV5 496 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACTL8Q9H568 366 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZSCAN32Q9NX65 697 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PPP1R9AQ9ULJ8 1098 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NOD1Q9Y239 953 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 R3HDM2Q9Y2K5 976 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 KLF2Q9Y5W3 355 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 IKBKGQ9Y6K9 419 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 SHANK1Q9Y566 2161 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CYP2D7A0A087X1C5 515 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 MYMKA6NI61 221 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 EIF4E1BA6NMX2 242 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 EIF3CLB5ME19 914 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 EYA2O00167 538 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TBC1D4O60343 1298 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 SRGAP2O75044 1071 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 STK10O94804 968 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TBX6O95947 436 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 KLRC1P26715 233 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CA5AP35218 305 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CA8P35219 290 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PRPHP41219 470 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 MRPL19P49406 292 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CDR2Q01850 454 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ADAM9Q13443 819 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 BLMHQ13867 455 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 MCM6Q14566 821 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TEAD4Q15561 434 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 OCLNQ16625 522 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 IMMTQ16891 758 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms