RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 DICER1Q9UPY3 1922 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 hCG_1807616A0A1W2PRN6 198 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ENC1O14682 589 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 OPA1O60313 960 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 IFNB1P01574 187 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CYP2E1P05181 493 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CKBP12277 381 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PEX2P28328 305 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CDR1P51861 262 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 BLVRAP53004 296 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 HDAC4P56524 1084 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 RNASE9P60153 205 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ERVK-21P61565 698 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SEMA5AQ13591 1074 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SNX1Q13596 522 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ERV3-1Q14264 604 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 NFE2L1Q14494 772 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 DLGAP5Q15398 846 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 STK11Q15831 433 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAPKAPK3Q16644 382 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TMEM266Q2M3C6 531 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ALG11Q2TAA5 492 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ANGEL2Q5VTE6 544 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 RFX8Q6ZV50 586 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SRGAP1Q7Z6B7 1085 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 HOOK3Q86VS8 718 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 KRT73Q86Y46 540 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLITRK4Q8IW52 837 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM114A1Q8IWE2 563 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CCDC83Q8IWF9 413 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TNS4Q8IZW8 715 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TTC39CQ8N584 583 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ATG16L2Q8NAA4 619 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF527Q8NB42 609 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCSK9Q8NBP7 692 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SIMC1Q8NDZ2 872 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 GDAP1Q8TB36 358 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 BSNDQ8WZ55 320 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 HTRA1Q92743 480 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PHF20Q9BVI0 1012 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 KRT23Q9C075 422 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRPV6Q9H1D0 765 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TDRD3Q9H7E2 651 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 MMRN2Q9H8L6 949 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADARB2Q9NS39 739 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TOMM22Q9NS69 142 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM153AQ9UHL3 310 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 AGO2Q9UKV8 859 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CARD8Q9Y2G2 431 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 WDR19Q8NEZ3 1342 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 A0A1W2PRU2 124 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 NUDT19A8MXV4 375 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADM5C9JUS6 153 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 POTEB2H3BUK9 544 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 WNT10BO00744 389 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 GIPC1O14908 333 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 RNF113AO15541 343 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PRPSAP2O60256 369 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 OPN1MWP04001 364 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 OPN1MW2P0DN77 364 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 OPN1MW3P0DN78 364 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 HOXB3P14651 431 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 MX1P20591 662 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SFPQP23246 707 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 PDIA3P30101 505 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 HOXA11P31270 313 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TLX1P31314 330 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 MC4RP32245 332 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 HNF1BP35680 557 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 GPC3P51654 580 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLC12A3P55017 1021 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CYP4F8P98187 520 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 NRG1Q02297 640 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 RUNX1T1Q06455 604 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 NR5A1Q13285 461 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRP8Q14114 963 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 LONRF2Q1L5Z9 754 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLC5A9Q2M3M2 681 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 INAVAQ3KP66 663 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAP3K21Q5TCX8 1036 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 NEK5Q6P3R8 708 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRSAM1Q6UWE0 723 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 LBX2Q6XYB7 198 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 GK5Q6ZS86 529 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SH3BP5LQ7L8J4 393 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 OVCH2Q7RTZ1 564 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 MTDHQ86UE4 582 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 CHD1LQ86WJ1 897 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 REXO1Q8N1G1 1221 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 FBXO15Q8NCQ5 510 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 RNF214Q8ND24 703 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 AGBL3Q8NEM8 1001 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 C1orf162Q8NEQ5 155 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ANKRD20A12PQ8NF67 263 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRIM58Q8NG06 486 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 SEPT1Q8WYJ6 367 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 RUBCNQ92622 972 aa5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 ACSF2Q96CM8 615 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms