RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 NPTXRO95502 500 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 ATF7P17544 494 aaPredicted RBP17.53■□□□□ 0.4
CXCL3-204ENST00000511669 RRM1P23921 792 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 SLC7A5Q01650 507 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 DHX34Q14147 1143 aaKnown RBP17.53■□□□□ 0.4
CXCL3-204ENST00000511669 CCL14Q16627 93 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 TAF2Q6P1X5 1199 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 RSPH3Q86UC2 560 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 BEST2Q8NFU1 509 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 WHAMMQ8TF30 809 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 AENQ8WTP8 325 aaKnown RBP17.53■□□□□ 0.4
CXCL3-204ENST00000511669 CD101Q93033 1021 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 HPDLQ96IR7 371 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 MIS12Q9H081 205 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 EPB41L5Q9HCM4 733 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 MED4Q9NPJ6 270 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 DPP3Q9NY33 737 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 IP6K2Q9UHH9 426 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 KIAA1257Q9ULG3 409 aa17.53■□□□□ 0.4
CXCL3-204ENST00000511669 RAD51CO43502 376 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 ZMYND10O75800 440 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 SASH3O75995 380 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
CXCL3-204ENST00000511669 WEE2P0C1S8 567 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 CD19P15391 556 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 MMP8P22894 467 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 CDH5P33151 784 aaPredicted RBP17.52■□□□□ 0.4
CXCL3-204ENST00000511669 MAN1A1P33908 653 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 PLA2G4AP47712 749 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 FAM193AP78312 1265 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 GABPB1Q06547 395 aaPredicted RBP17.52■□□□□ 0.4
CXCL3-204ENST00000511669 PLEKHA7Q6IQ23 1121 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 PASD1Q8IV76 773 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 TMEM192Q8IY95 271 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
CXCL3-204ENST00000511669 CAVIN3Q969G5 261 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 LHX5Q9H2C1 402 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 SIX4Q9UIU6 781 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 AGAP1Q9UPQ3 857 aa17.52■□□□□ 0.4
CXCL3-204ENST00000511669 DOCK3Q8IZD9 2030 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 FAM187AA6NFU0 413 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 FAM155AB1AL88 458 aaPredicted RBP17.51■□□□□ 0.39
CXCL3-204ENST00000511669 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
CXCL3-204ENST00000511669 PSTPIP1O43586 416 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 PROSCO94903 275 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 CHRNA3P32297 505 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 GBP1P32455 592 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 CRYBB1P53674 252 aaPredicted RBP17.51■□□□□ 0.39
CXCL3-204ENST00000511669 PTP4A2Q12974 167 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 STILQ15468 1287 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 MMS22LQ6ZRQ5 1243 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 ERICH1Q86X53 443 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 SMC1BQ8NDV3 1235 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 FEZF2Q8TBJ5 459 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 HDAC7Q8WUI4 952 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 RUFY1Q96T51 708 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 OSMRQ99650 979 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
CXCL3-204ENST00000511669 FAM114A2Q9NRY5 505 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 WDR35Q9P2L0 1181 aa17.51■□□□□ 0.39
CXCL3-204ENST00000511669 BRD2P25440 801 aaKnown RBP17.5■□□□□ 0.39
CXCL3-204ENST00000511669 PEX5P50542 639 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 ADAM17P78536 824 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 ZNF394Q53GI3 561 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 DCAF12L1Q5VU92 463 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 DNAJC24Q6P3W2 148 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 DNAJB3Q8WWF6 145 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 ALG3Q92685 438 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 TMEM88BA6NKF7 163 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 PHF2O75151 1096 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 C6orf222P0C671 652 aaPredicted RBP17.5■□□□□ 0.39
CXCL3-204ENST00000511669 VDRP11473 427 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 PURAQ00577 322 aaKnown RBP17.5■□□□□ 0.39
CXCL3-204ENST00000511669 DCUN1D2Q6PH85 259 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
CXCL3-204ENST00000511669 SND1Q7KZF4 910 aaKnown RBP eCLIP17.5■□□□□ 0.39
CXCL3-204ENST00000511669 IFT81Q8WYA0 676 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 TMEM176AQ96HP8 235 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 SNX27Q96L92 541 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 DDX47Q9H0S4 455 aaKnown RBP17.5■□□□□ 0.39
CXCL3-204ENST00000511669 POLIQ9UNA4 740 aa17.5■□□□□ 0.39
CXCL3-204ENST00000511669 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.5■□□□□ 0.39
CXCL3-204ENST00000511669 FAM170AA1A519 330 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 CALCAP01258 141 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 CD4P01730 458 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 IGHA2P01877 340 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 GLI1P08151 1106 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 PSMC4P43686 418 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 SNX16P57768 344 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 GJA9P57773 515 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 DR1Q01658 176 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 PTPN11Q06124 597 aaPredicted RBP17.49■□□□□ 0.39
CXCL3-204ENST00000511669 TMEM62Q0P6H9 643 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 ZNF211Q13398 564 aaPredicted RBP17.49■□□□□ 0.39
CXCL3-204ENST00000511669 MAMLD1Q13495 774 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 HLTFQ14527 1009 aaKnown RBP eCLIP17.49■□□□□ 0.39
CXCL3-204ENST00000511669 SNX17Q15036 470 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 ODF2Q5BJF6 829 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms