RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 POLR2DO15514 142 aaKnown RBP13.03□□□□□ -0.32
CHFR-208ENST00000511001 PI15O43692 258 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 MOSPD3O75425 235 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 ODC1P11926 461 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 PAX3P23760 479 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 CASP1P29466 404 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 EHHADHQ08426 723 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 TWF1Q12792 350 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 GPR17Q13304 367 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 MYBPC2Q14324 1141 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 ATL3Q6DD88 541 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 EPM2AIP1Q7L775 607 aaPredicted RBP13.03□□□□□ -0.32
CHFR-208ENST00000511001 USP37Q86T82 979 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 NT5DC4Q86YG4 428 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 SYCP3Q8IZU3 236 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 SIX5Q8N196 739 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 GPR152Q8TDT2 470 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 MCRS1Q96EZ8 462 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 FAM84AQ96KN4 292 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 C7orf25Q9BPX7 421 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 RTP3Q9BQQ7 232 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 CORO1BQ9BR76 489 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 OXCT2Q9BYC2 517 aaPredicted RBP13.03□□□□□ -0.32
CHFR-208ENST00000511001 DNAJC25Q9H1X3 360 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 MFSD1Q9H3U5 465 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 SLC2A4RGQ9NR83 387 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 RCOR1Q9UKL0 485 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 ZDHHC9Q9Y397 364 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 YIPF1Q9Y548 306 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 OBSL1O75147 1896 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 NUP210Q8TEM1 1887 aaPredicted RBP13.03□□□□□ -0.32
CHFR-208ENST00000511001 ZNF638Q14966 1978 aaKnown RBP13.03□□□□□ -0.32
CHFR-208ENST00000511001 MTMR11A4FU01 709 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
CHFR-208ENST00000511001 EXTL3O43909 919 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 LDHAP00338 332 aaKnown RBP13.02□□□□□ -0.33
CHFR-208ENST00000511001 AOC1P19801 751 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 TAF6P49848 677 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 NUBP1P53384 320 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 EPHA5P54756 1037 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 ASIC1P78348 528 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 CENPPQ6IPU0 288 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 MTSS1LQ765P7 747 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 TTC9BQ8N6N2 239 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 C1orf127Q8N9H9 656 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 FLCNQ8NFG4 579 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 OR10T2Q8NGX3 314 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 CXorf38Q8TB03 319 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 CHAMP1Q96JM3 812 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 PGLYRP2Q96PD5 576 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 LRRC3Q9BY71 257 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 PLA2G2FQ9BZM2 168 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 LRRC27Q9C0I9 530 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 TMEM206Q9H813 350 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 GDE1Q9NZC3 331 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 CA14Q9ULX7 337 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 CACNA1IQ9P0X4 2223 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 FAM186AA6NE01 2351 aa13.02□□□□□ -0.33
CHFR-208ENST00000511001 GREB1Q4ZG55 1949 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 TICRRQ7Z2Z1 1910 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 CYB561D2O14569 222 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 EIF3DO15371 548 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHFR-208ENST00000511001 TGFB1I1O43294 461 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 GFRA3O60609 400 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 MICAL2O94851 1124 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 FCARP24071 287 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 ME1P48163 572 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 GPC5P78333 572 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 AMPD3Q01432 767 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 DUSP4Q13115 394 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 WSCD1Q658N2 575 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 UNC13DQ70J99 1090 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 TMC8Q8IU68 726 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 GPD1LQ8N335 351 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 ZNF512Q96ME7 567 aaPredicted RBP13.01□□□□□ -0.33
CHFR-208ENST00000511001 KXD1Q9BQD3 176 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 PYM1Q9BRP8 204 aaKnown RBP13.01□□□□□ -0.33
CHFR-208ENST00000511001 MAGEF1Q9HAY2 307 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 RBAKQ9NYW8 714 aaPredicted RBP13.01□□□□□ -0.33
CHFR-208ENST00000511001 CFAP45Q9UL16 551 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 PTPRDP23468 1912 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 FANCMQ8IYD8 2048 aa13.01□□□□□ -0.33
CHFR-208ENST00000511001 RIF1Q5UIP0 2472 aaKnown RBP13.01□□□□□ -0.33
CHFR-208ENST00000511001 KPNA7A9QM74 516 aa13□□□□□ -0.33
CHFR-208ENST00000511001 ZNF197O14709 1029 aa13□□□□□ -0.33
CHFR-208ENST00000511001 KIAA0391O15091 583 aaKnown RBP13□□□□□ -0.33
CHFR-208ENST00000511001 POLR2BP30876 1174 aaKnown RBP13□□□□□ -0.33
CHFR-208ENST00000511001 TFAMQ00059 246 aaKnown RBP13□□□□□ -0.33
CHFR-208ENST00000511001 CUL4BQ13620 913 aa13□□□□□ -0.33
CHFR-208ENST00000511001 TANGO2Q6ICL3 276 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms