RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 KCNMB3Q9NPA1 279 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 BARX2Q9UMQ3 279 aaPredicted RBP13.26□□□□□ -0.29
LIN54-210ENST00000510877 KPNA7A9QM74 516 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 NT5DC4Q86YG4 428 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 ENGASEQ8NFI3 743 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 TRMT61BQ9BVS5 477 aaKnown RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 RGS18Q9NS28 235 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 ZNF862O60290 1169 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 FDPSP14324 419 aaKnown RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 NSFP46459 744 aaKnown RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 GRAMD1CQ8IYS0 662 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 TTC8Q8TAM2 541 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 IGSF21Q96ID5 467 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 CDT1Q9H211 546 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 STAP1Q9ULZ2 295 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 M0QYV0 167 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 AFPP02771 609 aaKnown RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 PLCB3Q01970 1234 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 DNAJC21Q5F1R6 531 aaKnown RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 P2RX5Q93086 422 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 DHTKD1Q96HY7 919 aaPredicted RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 SUDS3Q9H7L9 328 aaPredicted RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 PRR23AA6NEV1 266 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 TMEM110-MUSTN1A8MSY1 372 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 LACTBL1A8MY62 500 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 NBNO60934 754 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 GARTP22102 1010 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 PRSS55Q6UWB4 352 aaPredicted RBP13.25□□□□□ -0.29
LIN54-210ENST00000510877 SPATA24Q86W54 205 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 DDI1Q8WTU0 396 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 SHISA4Q96DD7 197 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 PCDHB9Q9Y5E1 797 aa13.25□□□□□ -0.29
LIN54-210ENST00000510877 GRM5P41594 1212 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 DUSP4Q13115 394 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 NAA25Q14CX7 972 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 CEP112Q8N8E3 955 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
LIN54-210ENST00000510877 FBXL13Q8NEE6 735 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 IRF7Q92985 503 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 NCAPGQ9BPX3 1015 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 MTMR12Q9C0I1 747 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 CHRNA1P02708 482 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 ACAT1P24752 427 aaKnown RBP13.24□□□□□ -0.29
LIN54-210ENST00000510877 SLC11A1P49279 550 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 EEF1DP3Q658K8 133 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 TMEM86AQ8N2M4 240 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 OXCT2Q9BYC2 517 aaPredicted RBP13.24□□□□□ -0.29
LIN54-210ENST00000510877 UBE2TQ9NPD8 197 aaPredicted RBP13.24□□□□□ -0.29
LIN54-210ENST00000510877 USTQ9Y2C2 406 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 IKBKBO14920 756 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 SMARCB1Q12824 385 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 CPA6Q8N4T0 437 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 SPPL2BQ8TCT7 592 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 DHX33Q9H6R0 707 aaKnown RBP13.24□□□□□ -0.29
LIN54-210ENST00000510877 NLRC4Q9NPP4 1024 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 ITGA11Q9UKX5 1188 aa13.24□□□□□ -0.29
LIN54-210ENST00000510877 GRM6O15303 877 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 TSPAN1O60635 241 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 LRRN2O75325 713 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 YWHAQP27348 245 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 SNRPFP62306 86 aaKnown RBP13.23□□□□□ -0.29
LIN54-210ENST00000510877 CDK17Q00537 523 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 GRSF1Q12849 480 aaKnown RBP eCLIP13.23□□□□□ -0.29
LIN54-210ENST00000510877 B4GALNT4Q76KP1 1039 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 LEMD2Q8NC56 503 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 EIF2AQ9BY44 585 aaKnown RBP13.23□□□□□ -0.29
LIN54-210ENST00000510877 FOXP2O15409 715 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 GDI1P31150 447 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 NDUFA8P51970 172 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 IL31Q6EBC2 164 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 RWDD4Q6NW29 188 aaKnown RBP13.23□□□□□ -0.29
LIN54-210ENST00000510877 ZBTB45Q96K62 511 aaPredicted RBP13.23□□□□□ -0.29
LIN54-210ENST00000510877 FBXO44Q9H4M3 255 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 SPEF2Q9C093 1822 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 SOD2P04179 222 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 BMP8BP34820 402 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 SLC11A2P49281 568 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 ZNF445P59923 1031 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 RESTQ13127 1097 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 NDUFAF2Q8N183 169 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
LIN54-210ENST00000510877 SYN3O14994 580 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 OPA1O60313 960 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 RTN3O95197 1032 aaPredicted RBP13.23□□□□□ -0.29
LIN54-210ENST00000510877 PSMC1P62191 440 aaKnown RBP13.23□□□□□ -0.29
LIN54-210ENST00000510877 STILQ15468 1287 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 ELF2Q15723 593 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 C1orf53Q5VUE5 145 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 DDX42Q86XP3 938 aaKnown RBP eCLIP13.23□□□□□ -0.29
LIN54-210ENST00000510877 FBXL16Q8N461 479 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 ETNPPLQ8TBG4 499 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 PAGE5Q96GU1 130 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 SIK2Q9H0K1 926 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms