RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GOLGA8IPA6NC78 632 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 GOLGA8JA6NMD2 632 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 POLR2DO15514 142 aaKnown RBP24.83■■□□□ 1.57
SNF8-209ENST00000510558 CYP11A1P05108 521 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 CEBPBP17676 345 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 GPR17Q13304 367 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 ARMCX5Q6P1M9 558 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 MCRS1Q96EZ8 462 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 PCIF1Q9H4Z3 704 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 MAGEF1Q9HAY2 307 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 FAM13BQ9NYF5 915 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 GDE1Q9NZC3 331 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 CEP72Q9P209 647 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 YIPF1Q9Y548 306 aa24.83■■□□□ 1.57
SNF8-209ENST00000510558 TULP1O00294 542 aaPredicted RBP24.82■■□□□ 1.56
SNF8-209ENST00000510558 ZNF197O14709 1029 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 GALR2O43603 387 aaPredicted RBP24.82■■□□□ 1.56
SNF8-209ENST00000510558 EXTL3O43909 919 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 AOC1P19801 751 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 PRSS36Q5K4E3 855 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 RESP18Q5W5W9 173 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 IQCEQ6IPM2 695 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 PDZD4Q76G19 769 aaPredicted RBP24.82■■□□□ 1.56
SNF8-209ENST00000510558 NOC3LQ8WTT2 800 aaKnown RBP24.82■■□□□ 1.56
SNF8-209ENST00000510558 TCEAL4Q96EI5 215 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 ZNF512Q96ME7 567 aaPredicted RBP24.82■■□□□ 1.56
SNF8-209ENST00000510558 TMEM209Q96SK2 561 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 C7orf25Q9BPX7 421 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 PYM1Q9BRP8 204 aaKnown RBP24.82■■□□□ 1.56
SNF8-209ENST00000510558 DSEQ9UL01 958 aa24.82■■□□□ 1.56
SNF8-209ENST00000510558 CYB561D2O14569 222 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 TFAMQ00059 246 aaKnown RBP24.81■■□□□ 1.56
SNF8-209ENST00000510558 DUSP4Q13115 394 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 SV2CQ496J9 727 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 HS6ST3Q8IZP7 471 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 OR10T2Q8NGX3 314 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 ZNF560Q96MR9 790 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 KXD1Q9BQD3 176 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 CRISPLD1Q9H336 500 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 RCOR1Q9UKL0 485 aa24.81■■□□□ 1.56
SNF8-209ENST00000510558 CACNA1HO95180 2353 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 MTMR11A4FU01 709 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 EIF3DO15371 548 aaKnown RBP eCLIP24.8■■□□□ 1.56
SNF8-209ENST00000510558 PI15O43692 258 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 CCR2P41597 374 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 GPC5P78333 572 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 FAM26FQ5R3K3 315 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 CYP4A22Q5TCH4 519 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 POTEHQ6S545 545 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 ALYREFQ86V81 257 aaKnown RBP24.8■■□□□ 1.56
SNF8-209ENST00000510558 METTL23Q86XA0 190 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 GPD1LQ8N335 351 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 BORCS6Q96GS4 357 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 ARHGEF3Q9NR81 526 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 PIEZO1Q92508 2521 aa24.8■■□□□ 1.56
SNF8-209ENST00000510558 KPNA7A9QM74 516 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 STK25O00506 426 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 KIAA0391O15091 583 aaKnown RBP24.79■■□□□ 1.56
SNF8-209ENST00000510558 MICAL2O94851 1124 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 RFX1P22670 979 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 POLR2BP30876 1174 aaKnown RBP24.79■■□□□ 1.56
SNF8-209ENST00000510558 HOXD13P35453 343 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 EPHA5P54756 1037 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 PLD1Q13393 1074 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 CENPPQ6IPU0 288 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 UNC13DQ70J99 1090 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 EPM2AIP1Q7L775 607 aaPredicted RBP24.79■■□□□ 1.56
SNF8-209ENST00000510558 C1orf127Q8N9H9 656 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 ATAD1Q8NBU5 361 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 CACTINQ8WUQ7 758 aaKnown RBP24.79■■□□□ 1.56
SNF8-209ENST00000510558 RTP3Q9BQQ7 232 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 IRF2BPLQ9H1B7 796 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 BLZF1Q9H2G9 400 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 TBC1D17Q9HA65 648 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 PDE11AQ9HCR9 933 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 ASAH2Q9NR71 780 aa24.79■■□□□ 1.56
SNF8-209ENST00000510558 NRG2O14511 850 aaPredicted RBP24.78■■□□□ 1.56
SNF8-209ENST00000510558 ITGB3P05106 788 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 CASP1P29466 404 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 PNPLA4P41247 253 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 WSCD1Q658N2 575 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 TTC9BQ8N6N2 239 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 LEMD2Q8NC56 503 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 ZNF507Q8TCN5 953 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 PHOX2BQ99453 314 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 DNAJC25Q9H1X3 360 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 AGAP1Q9UPQ3 857 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 SLC27A5Q9Y2P5 690 aa24.78■■□□□ 1.56
SNF8-209ENST00000510558 H0Y858 1186 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 ECI2O75521 394 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 MYL4P12829 197 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 AFMP43652 599 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 ALDH1A3P47895 512 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 MRE11P49959 708 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 EPHB3P54753 998 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 EHHADHQ08426 723 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 THEM5Q8N1Q8 247 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 FAM84AQ96KN4 292 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 ZCWPW1Q9H0M4 648 aa24.77■■□□□ 1.56
SNF8-209ENST00000510558 ITGA11Q9UKX5 1188 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms