RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 GDF6Q6KF10 455 aaPredicted RBP17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 TAS1R3Q7RTX0 852 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 CROCCP2Q86T23 111 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 SESTD1Q86VW0 696 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 JAMLQ86YT9 394 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 ZBTB8OSQ8IWT0 167 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 MYCBPAPQ8TBZ2 947 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 EPS8L1Q8TE68 723 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 SHC3Q92529 594 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 ZNF333Q96JL9 665 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 TRIM51Q9BSJ1 452 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 C2orf40Q9H1Z8 148 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 DPH5Q9H2P9 285 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 COQ4Q9Y3A0 265 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 EVPLQ92817 2033 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 A0A1W2PQ45 241 aaPredicted RBP17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 A0A1W2PQY0 241 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 DNM1LO00429 736 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 PODXLO00592 558 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 KIAA0754O94854 1291 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 CYP1A2P05177 515 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 CTNNA2P26232 953 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 GTF2H1P32780 548 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 CDR1P51861 262 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 SEL1L2Q5TEA6 688 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 OR2W6PQ8NHA6 318 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 TMC2Q8TDI7 906 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 DNAJB3Q8WWF6 145 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 NLRP7Q8WX94 980 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 KCNN1Q92952 543 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 SCLT1Q96NL6 688 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 TMEM134Q9H6X4 195 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 CNOT10Q9H9A5 744 aaKnown RBP17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 NR2E1Q9Y466 385 aa17.11■□□□□ 0.33
SQSTM1-213ENST00000510187 A0A087WZ62 844 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 CHRNB2P17787 502 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 PHKA2P46019 1235 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 GPC3P51654 580 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 NLRP11P59045 1033 aaKnown RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 TMEM62Q0P6H9 643 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 CYP1B1Q16678 543 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 TAF2Q6P1X5 1199 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 USP37Q86T82 979 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 PLEKHO2Q8TD55 490 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 CD101Q93033 1021 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 BICD1Q96G01 975 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 CCT8L2Q96SF2 557 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 IFT122Q9HBG6 1241 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 STARD7Q9NQZ5 370 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 UVRAGQ9P2Y5 699 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 GTF3C4Q9UKN8 822 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 OGDHLQ9ULD0 1010 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 PHF24Q9UPV7 400 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 FRMPD3Q5JV73 1810 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 TISP43B9A030 160 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 HNRNPDLO14979 420 aaKnown RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 KIAA0391O15091 583 aaKnown RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 MEFVO15553 781 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 HPDP32754 393 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 PTGIRP43119 386 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 PEX5P50542 639 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 POU5F1BQ06416 359 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 ZNF211Q13398 564 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 MAPK6Q16659 721 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 KRT71Q3SY84 523 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 KRT39Q6A163 491 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 NOP9Q86U38 636 aaKnown RBP17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 TLCD1Q96CP7 247 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 CENPHQ9H3R5 247 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 TMEM8AQ9HCN3 771 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 ERVK-5Q9HDB9 667 aa17.1■□□□□ 0.33
SQSTM1-213ENST00000510187 INO80B-WBP1J3KQ70 363 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 SGPL1O95470 568 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 ADRB2P07550 413 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 IFFO1Q0D2I5 559 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 SNRNP35Q16560 246 aaKnown RBP17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 SKIDA1Q1XH10 827 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 KIZQ2M2Z5 673 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 ZNF410Q86VK4 478 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 FAM81BQ96LP2 452 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 KREMEN1Q96MU8 473 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 PCDHB18PQ96TA0 734 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 INO80BQ9C086 356 aaPredicted RBP17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 PABPC3Q9H361 631 aaKnown RBP17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 RABEP2Q9H5N1 569 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 MTUS1Q9ULD2 1270 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
SQSTM1-213ENST00000510187 GMNCA6NCL1 334 aa17.08■□□□□ 0.32
SQSTM1-213ENST00000510187 ANKRD65E5RJM6 399 aa17.08■□□□□ 0.32
SQSTM1-213ENST00000510187 TRAPPC3O43617 180 aa17.08■□□□□ 0.32
SQSTM1-213ENST00000510187 COMTP21964 271 aa17.08■□□□□ 0.32
SQSTM1-213ENST00000510187 LIG4P49917 911 aa17.08■□□□□ 0.32
SQSTM1-213ENST00000510187 PMS2P54278 862 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms