RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PLEKHA5Q9HAU0 1116 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 IL21Q9HBE4 155 aa17.32■□□□□ 0.36
RAB40C-202ENST00000509637 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-202ENST00000509637 TSC2P49815 1807 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 SDK1Q7Z5N4 2213 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 K7ESF4 209 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 MAN2B1O00754 1011 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 NCAM2O15394 837 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 PIGRP01833 764 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 NFICP08651 508 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 CYP3A5P20815 502 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 MARCKSP29966 332 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-202ENST00000509637 WNT7BP56706 349 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 LILRA4P59901 499 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 STRN3Q13033 797 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 SPATA1Q5VX52 437 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 JADE1Q6IE81 842 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 IQCEQ6IPM2 695 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 DNAJB7Q7Z6W7 309 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-202ENST00000509637 LRRTM3Q86VH5 581 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 CHFRQ96EP1 664 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 BORCS6Q96GS4 357 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 SENP8Q96LD8 212 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 ASAH2Q9NR71 780 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 CPSF3Q9UKF6 684 aaKnown RBP17.31■□□□□ 0.36
RAB40C-202ENST00000509637 MAFFQ9ULX9 164 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
RAB40C-202ENST00000509637 UBQLN1Q9UMX0 589 aaKnown RBP17.31■□□□□ 0.36
RAB40C-202ENST00000509637 MRPS17Q9Y2R5 130 aaKnown RBP17.31■□□□□ 0.36
RAB40C-202ENST00000509637 A0A0B4J269 797 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 ANO9A1A5B4 782 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 DCDC2BA2VCK2 349 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 SLC38A8A6NNN8 435 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 CHURC1-FNTBB4DL54 471 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 PIRO00625 290 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 ZNF263O14978 683 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 PRAMEF12O95522 483 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 FNTBP49356 437 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 ZNF131P52739 623 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 FCHO2Q0JRZ9 810 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 MCM6Q14566 821 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 PKN3Q6P5Z2 889 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 RIN3Q8TB24 985 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 DEPDC1BQ8WUY9 529 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 LPIN3Q9BQK8 851 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 GTSE1Q9NYZ3 720 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.3■□□□□ 0.36
RAB40C-202ENST00000509637 ATG2BQ96BY7 2078 aa17.3■□□□□ 0.36
RAB40C-202ENST00000509637 OGTO15294 1046 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 ATF6P18850 670 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 TYMPP19971 482 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 NMT1P30419 496 aaKnown RBP17.29■□□□□ 0.36
RAB40C-202ENST00000509637 SMTNP53814 917 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 TNK2Q07912 1038 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 SPEM2Q0P670 501 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 DHX8Q14562 1220 aaKnown RBP17.29■□□□□ 0.36
RAB40C-202ENST00000509637 ZC2HC1CQ53FD0 456 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-202ENST00000509637 C9orf57Q5W0N0 161 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 OVOS1Q6IE37 1185 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 TMEM150AQ86TG1 271 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 ZSWIM2Q8NEG5 633 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 FAM84AQ96KN4 292 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 CNTNAP3BQ96NU0 1288 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 CNTNAP3Q9BZ76 1288 aa17.29■□□□□ 0.36
RAB40C-202ENST00000509637 SMG9Q9H0W8 520 aaKnown RBP17.29■□□□□ 0.36
RAB40C-202ENST00000509637 POLR3BQ9NW08 1133 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-202ENST00000509637 TPRP12270 2363 aaKnown RBP17.29■□□□□ 0.36
RAB40C-202ENST00000509637 MYBPHLA2RUH7 354 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 OR6C75A6NL08 312 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 CHADO15335 359 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 NEFLP07196 543 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 MATR3P43243 847 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB40C-202ENST00000509637 CYP4F8P98187 520 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 CRELD2Q6UXH1 353 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-202ENST00000509637 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 USP49Q70CQ1 688 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 GPBP1Q86WP2 473 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 ELMOD1Q8N336 334 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 LEMD2Q8NC56 503 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 STKLD1Q8NE28 680 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 PSMG2Q969U7 264 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 FAM212AQ96EL1 285 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 TMX3Q96JJ7 454 aa17.28■□□□□ 0.36
RAB40C-202ENST00000509637 OTOL1A6NHN0 477 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-202ENST00000509637 CYP11A1P05108 521 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 GABRR2P28476 465 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 GJB2P29033 226 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 CTHP32929 405 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 CXCL12P48061 93 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 ACOT2P49753 483 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 LIG4P49917 911 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 MYBPC2Q14324 1141 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.36
RAB40C-202ENST00000509637 GPR158Q5T848 1215 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 BICD1Q96G01 975 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
RAB40C-202ENST00000509637 FAM126AQ9BYI3 521 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms