RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CTNNAL1Q9UBT7 734 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 SIP14410 1827 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 TMEM191CA6NGB0 347 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 CDH16O75309 829 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 ASS1P00966 412 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 KRT1P04264 644 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 TMEM191BP0C7N4 346 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 UBA1P22314 1058 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 KLRC2P26717 231 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 ALDH5A1P51649 535 aaPredicted RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 STAT5BP51692 787 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 TARBP2Q15633 366 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 P3H1Q32P28 736 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 KAZNQ674X7 775 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 HIBCHQ6NVY1 386 aaPredicted RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 DNAJC24Q6P3W2 148 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 VSTM1Q6UX27 236 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 PWWP2AQ96N64 755 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 MRPL4Q9BYD3 311 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 MTFR1LQ9H019 292 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 BRAFP15056 766 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 ATF7P17544 494 aaPredicted RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 RPL7AP62424 266 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 MCL1Q07820 350 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 FSTL1Q12841 308 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 DCUN1D2Q6PH85 259 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 ANKRD42Q8N9B4 389 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 TMEM35BQ8NCS4 154 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 SLITRK1Q96PX8 696 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 LGALS13Q9UHV8 139 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 ZNF148Q9UQR1 794 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 AFG3L2Q9Y4W6 797 aa18.99■□□□□ 0.63
CCHCR1-228ENST00000509552 PI4K2BG5E9Z4 385 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 LIASO43766 372 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 TOM1L1O75674 476 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 DNAJC8O75937 253 aaPredicted RBP18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 FARP2O94887 1054 aaPredicted RBP18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 CST3P01034 146 aaPredicted RBP18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 BAG6P46379 1132 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 NEDD9Q14511 834 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 LRRC38Q5VT99 294 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 ZBTB33Q86T24 672 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 ZCCHC9Q8N567 271 aaKnown RBP18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 UBR7Q8N806 425 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 PRPF31Q8WWY3 499 aaKnown RBP18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 RBM15Q96T37 977 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 KLHL11Q9NVR0 708 aa18.98■□□□□ 0.63
CCHCR1-228ENST00000509552 TCP11X1B4DZS4 312 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 MAFO75444 373 aaPredicted RBP18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 GSTA1P08263 222 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 CREB1P16220 341 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 COPS2P61201 443 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 TAP1Q03518 808 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 SF3A3Q12874 501 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■■□□□ 13.6
CCHCR1-228ENST00000509552 ANKS1BQ7Z6G8 1248 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 FAM212AQ96EL1 285 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 C9orf72Q96LT7 481 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 MCEEQ96PE7 176 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 PCYT2Q99447 389 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 ZNF518BQ9C0D4 1074 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 HAUS2Q9NVX0 235 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 FZD9O00144 591 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 SNX3O60493 162 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 KRT10P13645 584 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 TNFSF9P41273 254 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 MAGEA4P43358 317 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 XRCC4Q13426 336 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 TRPC3Q13507 836 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 SURF1Q15526 300 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 DUOXA2Q1HG44 320 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 SGSM1Q2NKQ1 1148 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 ATP13A4Q4VNC1 1196 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 NOL9Q5SY16 702 aaKnown RBP18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 DRICH1Q6PGQ1 229 aaPredicted RBP18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 ARHGEF18Q6ZSZ5 1173 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 TRPM8Q7Z2W7 1104 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 FUKQ8N0W3 1084 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 MTMR12Q9C0I1 747 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 NIF3L1Q9GZT8 377 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 CISHQ9NSE2 258 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 TBK1Q9UHD2 729 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 NAALADL1Q9UQQ1 740 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 CEP83Q9Y592 693 aa18.97■□□□□ 0.63
CCHCR1-228ENST00000509552 ABHD2P08910 425 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 NF2P35240 595 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 MYL6P60660 151 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 PIGHQ14442 188 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 SWT1Q5T5J6 900 aaKnown RBP18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 MFSD7Q6UXD7 560 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 RIBC1Q8N443 379 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 SGSM3Q96HU1 749 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 CFAP57Q96MR6 1250 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 DDX56Q9NY93 547 aaKnown RBP18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 NKIRAS1Q9NYS0 192 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 DNPEPQ9ULA0 475 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 PPME1Q9Y570 386 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 ACTL7BQ9Y614 415 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 IVNS1ABPQ9Y6Y0 642 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 DNALI1O14645 258 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms