RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 TATDN2Q93075 761 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 TMEM209Q96SK2 561 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 TUBGCP2Q9BSJ2 902 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 TTPALQ9BTX7 342 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 RXFP1Q9HBX9 757 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 TAB2Q9NYJ8 693 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
PTPN20-220ENST00000508715 ZNF638Q14966 1978 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 C2CD2LO14523 706 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 GABRDO14764 452 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 SYN3O14994 580 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 TEX28O15482 410 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 OAZ2O95190 189 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 VNN2O95498 520 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 CXCL14O95715 111 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 AFPP02771 609 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 CNPP09543 421 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 TYMPP19971 482 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 ASPAP45381 313 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 CDH8P55286 799 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 MAN2A1Q16706 1144 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 CCDC142Q17RM4 750 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 SV2CQ496J9 727 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 TCEAL5Q5H9L2 206 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 DSTYKQ6XUX3 929 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 TMC7Q7Z402 723 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 PDCL2Q8N4E4 241 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 FBXL13Q8NEE6 735 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 OR10T2Q8NGX3 314 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 RIN2Q8WYP3 895 aaPredicted RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 ZNF560Q96MR9 790 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 KLHL5Q96PQ7 755 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 MRPL45Q9BRJ2 306 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 RAB20Q9NX57 234 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 LIMA1Q9UHB6 759 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 PUF60Q9UHX1 559 aaKnown RBP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.11□□□□□ -0.63
PTPN20-220ENST00000508715 SNX9Q9Y5X1 595 aa11.11□□□□□ -0.63
PTPN20-220ENST00000508715 COL6A3P12111 3177 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 PER2O15055 1255 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 CLASP2O75122 1294 aaKnown RBP11.1□□□□□ -0.63
PTPN20-220ENST00000508715 PHACTR2O75167 634 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 SLC9A1P19634 815 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 LMO2P25791 158 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 ATICP31939 592 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 PNPLA4P41247 253 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 PIK3CAP42336 1068 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 MTIF2P46199 727 aaKnown RBP11.1□□□□□ -0.63
PTPN20-220ENST00000508715 RAP1GAPP47736 663 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
PTPN20-220ENST00000508715 NOP14P78316 857 aaKnown RBP11.1□□□□□ -0.63
PTPN20-220ENST00000508715 MYL7Q01449 175 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 HYAL1Q12794 435 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 TRPC3Q13507 836 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 COL19A1Q14993 1142 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 ZNF699Q32M78 642 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 WDR72Q3MJ13 1102 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 USP37Q86T82 979 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 LRRTM3Q86VH5 581 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 CREBRFQ8IUR6 639 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 GPR65Q8IYL9 337 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 TOP6BLQ8N6T0 577 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 UBR7Q8N806 425 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 EHBP1Q8NDI1 1231 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 FAM200AQ8TCP9 573 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 SLC22A17Q8WUG5 538 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 KAT5Q92993 513 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 PKMYT1Q99640 499 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 ARID3AQ99856 593 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 CRACR2AQ9BSW2 395 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 BCO2Q9BYV7 579 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 NAT10Q9H0A0 1025 aaKnown RBP11.1□□□□□ -0.63
PTPN20-220ENST00000508715 VPS16Q9H269 839 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 NDST4Q9H3R1 872 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 TSPY26PQ9H489 355 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 SMYD3Q9H7B4 428 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 SIX2Q9NPC8 291 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 ENTPD7Q9NQZ7 604 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 MTRRQ9UBK8 725 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
PTPN20-220ENST00000508715 FBXL5Q9UKA1 691 aa11.1□□□□□ -0.63
PTPN20-220ENST00000508715 AJAP1Q9UKB5 411 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-220ENST00000508715 DENND4CQ5VZ89 1909 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 DOCK8Q8NF50 2099 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-220ENST00000508715 P4HA2O15460 535 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 LINC01565O15544 149 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 STX10O60499 249 aa11.09□□□□□ -0.63
PTPN20-220ENST00000508715 GLP2RO95838 553 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms