RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 IGF2BP3O00425 579 aaKnown RBP eCLIP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 RGS16O15492 202 aaPredicted RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 AOC2O75106 756 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 CSDE1O75534 798 aaKnown RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 VNN1O95497 513 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 HLA-DRAP01903 254 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 C4BPAP04003 597 aaKnown RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 IQCF3P0C7M6 154 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 RARGP13631 454 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 CHRNB2P17787 502 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 MMP13P45452 471 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 ENPEPQ07075 957 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 NOGQ13253 232 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 ZPBP2Q6X784 338 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 TAOK1Q7L7X3 1001 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 PLEKHH3Q7Z736 793 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC114Q96M63 670 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 PCDHB18PQ96TA0 734 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 ACO2Q99798 780 aaKnown RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 MRPL4Q9BYD3 311 aaKnown RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC134Q9H6E4 229 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 CNOT8Q9UFF9 292 aaKnown RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 CHORDC1Q9UHD1 332 aaPredicted RBP11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 COG5Q9UP83 839 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 CNTNAP2Q9UHC6 1331 aa11.73□□□□□ -0.53
SH3RF1-203ENST00000508685 RBM47A0AV96 593 aaKnown RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 FAM155AB1AL88 458 aaPredicted RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 INO80B-WBP1J3KQ70 363 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 ABLIM1O14639 778 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CHUKO15111 745 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 RASSF9O75901 435 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 MMEP08473 750 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 SLC10A3P09131 477 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 SMPD1P17405 629 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 TMOD1P28289 359 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 MAN1A1P33908 653 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 PEX5P50542 639 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 PLTPP55058 493 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 ITIH4Q14624 930 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 SYDE1Q6ZW31 735 aaPredicted RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 ZBTB8OSQ8IWT0 167 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC13Q8IYE1 715 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 C12orf50Q8NA57 414 aaPredicted RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 ALG3Q92685 438 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 SLCO2A1Q92959 643 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 TINF2Q9BSI4 451 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 C16orf70Q9BSU1 422 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 INO80BQ9C086 356 aaPredicted RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 NR2E1Q9Y466 385 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 EVPLQ92817 2033 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CYP1A2P05177 515 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 KRT5P13647 590 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CYP11B1P15538 503 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 DRD4P21917 467 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 ATP5DP30049 168 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 FMO1Q01740 532 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 GCNT1Q02742 428 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 ZDHHC24Q6UX98 284 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 TRMT10CQ7L0Y3 403 aaKnown RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 EXOC8Q8IYI6 725 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 PRELID2Q8N945 189 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CEP120Q8N960 986 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 MAGEC3Q8TD91 643 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 CGRRF1Q99675 332 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 TRIM31Q9BZY9 425 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 NSRP1Q9H0G5 558 aaKnown RBP11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 KLC4Q9NSK0 619 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 GTF3C4Q9UKN8 822 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 SNX24Q9Y343 169 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 PCDHA3Q9Y5H8 950 aa11.72□□□□□ -0.53
SH3RF1-203ENST00000508685 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 CAND2O75155 1236 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 GSTA1P08263 222 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 MAPK4P31152 587 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 RDXP35241 583 aaKnown RBP11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 COILP38432 576 aaPredicted RBP11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 PDE6CP51160 858 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 OSTNP61366 133 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 MBTD1Q05BQ5 628 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 ACVR2BQ13705 512 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 ANKRD20A8PQ5CZ79 823 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 MFSD5Q6N075 450 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 CD101Q93033 1021 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 ART4Q93070 314 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 JPH2Q9BR39 696 aaPredicted RBP11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 C2orf40Q9H1Z8 148 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 APOBEC3GQ9HC16 384 aaKnown RBP11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
SH3RF1-203ENST00000508685 GRHL1Q9NZI5 618 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms