RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 UVSSAQ2YD98 709 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 RTL10Q7L3V2 364 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 METTL23Q86XA0 190 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 RNF135Q8IUD6 432 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 TIGD1Q96MW7 591 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 CYP4F11Q9HBI6 524 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 WDR6Q9NNW5 1121 aaKnown RBP18.27■□□□□ 0.52
CLDND1-219ENST00000508659 MUTYHQ9UIF7 546 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 POLIQ9UNA4 740 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 MAPK8IP1Q9UQF2 711 aa18.27■□□□□ 0.52
CLDND1-219ENST00000508659 TSC2P49815 1807 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 CCL16O15467 120 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 DCXO43602 365 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 ABLIM3O94929 683 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 LRG1P02750 347 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 CYP11A1P05108 521 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 ALADP13716 330 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 ATF2P15336 505 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 MYO1EQ12965 1108 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 OTOP3Q7RTS5 596 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 SLC9A9Q8IVB4 645 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 GUF1Q8N442 669 aaKnown RBP18.26■□□□□ 0.51
CLDND1-219ENST00000508659 OR5B17Q8NGF7 314 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 KHSRPQ92945 711 aaKnown RBP eCLIP18.26■□□□□ 0.513e-6■■■□□ 14.8
CLDND1-219ENST00000508659 SMARCE1Q969G3 411 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 ACSF2Q96CM8 615 aaPredicted RBP18.26■□□□□ 0.51
CLDND1-219ENST00000508659 AFF4Q9UHB7 1163 aaKnown RBP18.26■□□□□ 0.51
CLDND1-219ENST00000508659 SIX4Q9UIU6 781 aa18.26■□□□□ 0.51
CLDND1-219ENST00000508659 DENND4AQ7Z401 1863 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 POU2F2P09086 479 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 OR4Q2P0C623 313 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 ADCY1Q08828 1119 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 MYBPC2Q14324 1141 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 GET4Q7L5D6 327 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-219ENST00000508659 SMYD4Q8IYR2 804 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-219ENST00000508659 TMEM174Q8WUU8 243 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 GSDMAQ96QA5 445 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 TRAF3IP3Q9Y228 551 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 FRMD4BQ9Y2L6 1034 aa18.25■□□□□ 0.51
CLDND1-219ENST00000508659 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-219ENST00000508659 NR2F2P24468 414 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 GBP2P32456 591 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-219ENST00000508659 WSCD1Q658N2 575 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 CEP135Q66GS9 1140 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 GRASPQ7Z6J2 395 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-219ENST00000508659 TCEAL8Q8IYN2 117 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 THEM5Q8N1Q8 247 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 PLCD3Q8N3E9 789 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 OR10T2Q8NGX3 314 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 CXorf38Q8TB03 319 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 ERCC4Q92889 916 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-219ENST00000508659 MFSD14AQ96MC6 490 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 PGLYRP2Q96PD5 576 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 C1QTNF1Q9BXJ1 281 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 MAFFQ9ULX9 164 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 INSL5Q9Y5Q6 135 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 SNX9Q9Y5X1 595 aa18.24■□□□□ 0.51
CLDND1-219ENST00000508659 BDP1A6H8Y1 2624 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 PI4K2BG5E9Z4 385 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 HUS1O60921 280 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 CLSTN1O94985 981 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 UBE2HP62256 183 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 GPR17Q13304 367 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 ZNF658Q5TYW1 1059 aaPredicted RBP18.23■□□□□ 0.51
CLDND1-219ENST00000508659 RNF19BQ6ZMZ0 732 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 TRAPPC11Q7Z392 1133 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 BORCS6Q96GS4 357 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 HPDLQ96IR7 371 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
CLDND1-219ENST00000508659 DMAC2Q9NW81 257 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
CLDND1-219ENST00000508659 C2orf16Q68DN1 1984 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 SEC24AO95486 1093 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 FSHRP23945 695 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 RPL13P26373 211 aaKnown RBP18.22■□□□□ 0.51
CLDND1-219ENST00000508659 CASP4P49662 377 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 BIRC3Q13489 604 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 TRPC3Q13507 836 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 NFIL3Q16649 462 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 PABPC1LQ4VXU2 614 aaKnown RBP18.22■□□□□ 0.51
CLDND1-219ENST00000508659 ELOA2Q8IYF1 753 aaPredicted RBP18.22■□□□□ 0.51
CLDND1-219ENST00000508659 ADGRF2Q8IZF7 708 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 ZDHHC14Q8IZN3 488 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 TMEM86AQ8N2M4 240 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 ELMOD1Q8N336 334 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 PDCL2Q8N4E4 241 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 TOP6BLQ8N6T0 577 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 SPATA20Q8TB22 786 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 EPHX3Q9H6B9 360 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 GDAP2Q9NXN4 497 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 L1RE1Q9UN81 338 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 YIPF1Q9Y548 306 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 NCOR1O75376 2440 aa18.22■□□□□ 0.51
CLDND1-219ENST00000508659 MTMR11A4FU01 709 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 LRRIQ3A6PVS8 624 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-219ENST00000508659 PHACTR2O75167 634 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 AP3M2P53677 418 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 NTHL1P78549 312 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 MYL7Q01449 175 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 TSPY1Q01534 308 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms