RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 XRCC6P12956 609 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 TXKP42681 527 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 HK2P52789 917 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF445P59923 1031 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 ACTR2P61160 394 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 STK38Q15208 465 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 LRRC41Q15345 812 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 CLEC16AQ2KHT3 1053 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 HSDL1Q3SXM5 330 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 FAM160B1Q5W0V3 765 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 MRM1Q6IN84 353 aaKnown RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 CCSAPQ6IQ19 270 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 ABHD15Q6UXT9 468 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 CLEC17AQ6ZS10 378 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 MIER3Q7Z3K6 550 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 EMSYQ7Z589 1322 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 C7orf61Q8IZ16 206 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 IGSF22Q8N9C0 903 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 ST13P5Q8NFI4 369 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 AFG1LQ8WV93 481 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 ATP6V0A1Q93050 837 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 FAM167AQ96KS9 214 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 GLT1D1Q96MS3 346 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 DEFB118Q96PH6 123 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 ALPK1Q96QP1 1244 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 USP28Q96RU2 1077 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 MTG1Q9BT17 334 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 FOXP3Q9BZS1 431 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 TMEM60Q9H2L4 133 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 TUFT1Q9NNX1 390 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 RCOR1Q9UKL0 485 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 FBXL21Q9UKT6 434 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF215Q9UL58 517 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 TMA7Q9Y2S6 64 aaKnown RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 SRPRBQ9Y5M8 271 aaKnown RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 DDX49Q9Y6V7 483 aaKnown RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 MROH7Q68CQ1 1323 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 KDM3AQ9Y4C1 1321 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 GSTTP1A0A1W2PQM5 241 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 TMEM82A0PJX8 343 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 FAM221BA6H8Z2 402 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 CTAGE5O15320 804 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 ADCY6O43306 1168 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 HBP1O60381 514 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 CUTAO60888 179 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 LYPLA2O95372 231 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 PGK1P00558 417 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 F2P00734 622 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 LGALS2P05162 132 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZGLP1P0C6A0 271 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 GNAT1P11488 350 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 RPA1P27694 616 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 TCF7P36402 384 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 QARSP47897 775 aaKnown RBP6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 STAT5BP51692 787 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF143P52747 638 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 PSMC5P62195 406 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 PURAQ00577 322 aaKnown RBP6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 SLC7A5Q01650 507 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 SPIRE1Q08AE8 756 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 KCNA10Q16322 511 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 TIGD5Q53EQ6 642 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 KRT79Q5XKE5 535 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 NFRKBQ6P4R8 1299 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 C4orf19Q8IY42 314 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 EXOC8Q8IYI6 725 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 COPS5Q92905 334 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 ABHD8Q96I13 439 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 HSD17B14Q9BPX1 270 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 PYM1Q9BRP8 204 aaKnown RBP6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 POLR3CQ9BUI4 534 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 G6PC3Q9BUM1 346 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 NT5C3AQ9H0P0 336 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 EPN3Q9H201 632 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 UNC45AQ9H3U1 944 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 GP6Q9HCN6 339 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF302Q9NR11 478 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 ST7Q9NRC1 585 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 CHST7Q9NS84 486 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 NRBP2Q9NSY0 501 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 ERAP1Q9NZ08 941 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 LRWD1Q9UFC0 647 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 SUSD2Q9UGT4 822 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 CLIC4Q9Y696 253 aa6.11□□□□□ -1.43
HMGB1P44-201ENST00000508597 COL1A2P08123 1366 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 NRCAMQ92823 1304 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 IGSF9BQ9UPX0 1349 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 TLDC2A0PJX2 215 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 VWA3AA6NCI4 1184 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 RRN3P2A6NIE6 340 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 HAS3O00219 553 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 SLITRK3O94933 977 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 CCNE2O96020 404 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 ASGR1P07306 291 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 COL6A1P12109 1028 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 NCLP19338 710 aaKnown RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 CD247P20963 164 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 UBA7P41226 1012 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 TECP42680 631 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 ACLYP53396 1101 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms