RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 GAP43P17677 238 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 TYMPP19971 482 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 TXLNAP40222 546 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 EPHA5P54756 1037 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 GPR17Q13304 367 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 SNW1Q13573 536 aaKnown RBP17.57■□□□□ 0.4
LMNA-222ENST00000508500 E2F4Q16254 413 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
LMNA-222ENST00000508500 OVOS1Q6IE37 1185 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 CCDC73Q6ZRK6 1079 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 TTC9BQ8N6N2 239 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 PDILTQ8N807 584 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 GLIS3Q8NEA6 775 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 ZSWIM3Q96MP5 696 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 DDX23Q9BUQ8 820 aaKnown RBP17.57■□□□□ 0.4
LMNA-222ENST00000508500 FOXQ1Q9C009 403 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 OLFML3Q9NRN5 406 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 GDE1Q9NZC3 331 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 MAFFQ9ULX9 164 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 C2CD2Q9Y426 696 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 YIPF1Q9Y548 306 aa17.57■□□□□ 0.4
LMNA-222ENST00000508500 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.57■□□□□ 0.4
LMNA-222ENST00000508500 NCANO14594 1321 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 MTMR11A4FU01 709 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 SHISA7A6NL88 538 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 ECI2O75521 394 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 CYP11A1P05108 521 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 DCNP07585 359 aaKnown RBP17.56■□□□□ 0.4
LMNA-222ENST00000508500 STAT6P42226 847 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 DUSP4Q13115 394 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 ANGPT1Q15389 498 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 FAM78AQ5JUQ0 283 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 CENPPQ6IPU0 288 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 OR10T2Q8NGX3 314 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 POMGNT1Q8WZA1 660 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 SAAL1Q96ER3 474 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 FAM84AQ96KN4 292 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 DPP3Q9NY33 737 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 SLC27A5Q9Y2P5 690 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 GREB1Q4ZG55 1949 aa17.56■□□□□ 0.4
LMNA-222ENST00000508500 OR6C75A6NL08 312 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 SPTLC2O15270 562 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 MICAL2O94851 1124 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 GCNT3O95395 438 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 IDEP14735 1019 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 CDR1P51861 262 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 POU5F1Q01860 360 aaKnown RBP17.55■□□□□ 0.4
LMNA-222ENST00000508500 STK38Q15208 465 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 SLC44A4Q53GD3 710 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 PDZD4Q76G19 769 aaPredicted RBP17.55■□□□□ 0.4
LMNA-222ENST00000508500 USP37Q86T82 979 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 TMC8Q8IU68 726 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 ATAD1Q8NBU5 361 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 NKD2Q969F2 451 aaPredicted RBP17.55■□□□□ 0.4
LMNA-222ENST00000508500 HPS3Q969F9 1004 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 ZNF512Q96ME7 567 aaPredicted RBP17.55■□□□□ 0.4
LMNA-222ENST00000508500 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
LMNA-222ENST00000508500 ACCSQ96QU6 501 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 OXCT2Q9BYC2 517 aaPredicted RBP17.55■□□□□ 0.4
LMNA-222ENST00000508500 PANK4Q9NVE7 773 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 MTF2Q9Y483 593 aaPredicted RBP17.55■□□□□ 0.4
LMNA-222ENST00000508500 ANAPC1Q9H1A4 1944 aa17.55■□□□□ 0.4
LMNA-222ENST00000508500 PPP6R2O75170 966 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 SOAT2O75908 522 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
LMNA-222ENST00000508500 ODC1P11926 461 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 MYL4P12829 197 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 MYBPC2Q14324 1141 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 POSTNQ15063 836 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 MLF2Q15773 248 aaPredicted RBP17.54■□□□□ 0.4
LMNA-222ENST00000508500 FOXD4L5Q5VV16 416 aaPredicted RBP17.54■□□□□ 0.4
LMNA-222ENST00000508500 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 PJA1Q8NG27 643 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 CXorf38Q8TB03 319 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 FOXD4L4Q8WXT5 416 aaPredicted RBP17.54■□□□□ 0.4
LMNA-222ENST00000508500 ELSPBP1Q96BH3 223 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 ASB16Q96NS5 453 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 CBWD1Q9BRT8 395 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 FAM213AQ9BRX8 229 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 SIT1Q9Y3P8 196 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 PTPRDP23468 1912 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 OTOGLQ3ZCN5 2332 aa17.54■□□□□ 0.4
LMNA-222ENST00000508500 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 ZNF197O14709 1029 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 CD72P21854 359 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 HOXD13P35453 343 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 GRM2Q14416 872 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 BECN1Q14457 450 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 TEAD2Q15562 447 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 CYP4A22Q5TCH4 519 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 IQCEQ6IPM2 695 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 LRRTM3Q86VH5 581 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 BRSK2Q8IWQ3 736 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 SHKBP1Q8TBC3 707 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
LMNA-222ENST00000508500 KBTBD4Q9NVX7 518 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 EXOC7Q9UPT5 735 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 PCDHB13Q9Y5F0 798 aa17.53■□□□□ 0.4
LMNA-222ENST00000508500 EP300Q09472 2414 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms