RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NEK3P51956 506 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 NR1H2P55055 460 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 VCPP55072 806 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 HERVK_113P62684 666 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CD83Q01151 205 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 TFAP4Q01664 338 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CDR2Q01850 454 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CDC16Q13042 620 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 C16orf72Q14CZ0 275 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 MEA1Q16626 185 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CFAP221Q4G0U5 840 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 AGAP7PQ5VUJ5 663 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CDKAL1Q5VV42 579 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 GALNT13Q8IUC8 556 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 AHI1Q8N157 1196 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 MARVELD2Q8N4S9 558 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 SLC22A8Q8TCC7 542 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ADAMTS16Q8TE57 1224 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 TRIM63Q969Q1 353 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 TMEM87BQ96K49 555 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 TNIP3Q96KP6 325 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 FERD3LQ96RJ6 166 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 DNAJC7Q99615 494 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 COQ7Q99807 217 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 TRIM15Q9C019 465 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RNF38Q9H0F5 515 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 IL25Q9H293 177 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 C8orf33Q9H7E9 229 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 EPB41L5Q9HCM4 733 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 SALL4Q9UJQ4 1053 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 TRIM33Q9UPN9 1127 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 EID1Q9Y6B2 187 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RFX7Q2KHR2 1363 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 PTPRUQ92729 1446 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 COL3A1P02461 1466 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 BCL9LQ86UU0 1499 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ILVBLA1L0T0 632 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 MAGEB16A2A368 324 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 DCDC2CA8MYV0 355 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RSPH10B2B2RC85 870 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 H3BNX3 289 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 H7C1D1 291 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.596e-11■■□□□ 12.7
PDLIM5-210ENST00000508216 ZNF185O15231 689 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ZPR1O75312 459 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 CPDO75976 1380 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 FGAP02671 866 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 INHBBP09529 407 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RSPH10BP0C881 870 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RARGP13631 454 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 KRT20P35900 424 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 POLGP54098 1239 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 RALGDSQ12967 914 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 MTERF2Q49AM1 385 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 NADK2Q4G0N4 442 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ARMC4Q5T2S8 1044 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 IZUMO2Q6UXV1 221 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 FAM124AQ86V42 546 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 PDSS2Q86YH6 399 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 MYO3BQ8WXR4 1341 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 SEC14L1Q92503 715 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 PLEKHA8Q96JA3 519 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 INPP4AQ96PE3 977 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 OPALINQ96PE5 141 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ALPK1Q96QP1 1244 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 PHAXQ9H814 394 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 SIAEQ9HAT2 523 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 GPAMQ9HCL2 828 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 FANCFQ9NPI8 374 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 FNIP2Q9P278 1114 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ANKMY1Q9P2S6 941 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 FBXL5Q9UKA1 691 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 NUP50Q9UKX7 468 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 SOX13Q9UN79 622 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 TMEM5Q9Y2B1 443 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 AP3M1Q9Y2T2 418 aa11.36□□□□□ -0.59
PDLIM5-210ENST00000508216 ARHGEF28Q8N1W1 1705 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ARHGEF10O15013 1369 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 BTBD18B2RXH4 712 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 KPNA4O00629 521 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 TLR2O60603 784 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 MAFO75444 373 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 PRLP01236 227 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 SNRPAP09012 282 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 CD48P09326 243 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 AXLP30530 894 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ENTPD1P49961 510 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 CYP4F2P78329 520 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 ADAM17P78536 824 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 RAD51Q06609 339 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 CYP4F3Q08477 520 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 DSC3Q14574 896 aa11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 CERKLQ49MI3 558 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-210ENST00000508216 KCTD21Q4G0X4 260 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms