RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 COLGALT2Q8IYK4 626 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 CRIPAKQ8N1N5 446 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 RBBP8NLQ8NC74 664 aaPredicted RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 HASPINQ8TF76 798 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 CCDC42Q96M95 316 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.68■□□□□ 0.583e-6■■□□□ 12.4
RNF4-209ENST00000507784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.68■□□□□ 0.58
RNF4-209ENST00000507784 DNAJB4Q9UDY4 337 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 BZW2Q9Y6E2 419 aaKnown RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 DGKIO75912 1065 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 TNFAIP3P21580 790 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 FECHP22830 423 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 CLCN1P35523 988 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 CDK17Q00537 523 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 MTF1Q14872 753 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 TMEM240Q5SV17 173 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 HGSNATQ68CP4 663 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 UBR7Q8N806 425 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 APPL2Q8NEU8 664 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 SENP8Q96LD8 212 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 MRPL45Q9BRJ2 306 aaKnown RBP18.67■□□□□ 0.58
RNF4-209ENST00000507784 SEPT11Q9NVA2 429 aaKnown RBP18.67■□□□□ 0.58
RNF4-209ENST00000507784 GDAP2Q9NXN4 497 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 ARHGAP20Q9P2F6 1191 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 PRG3Q9Y2Y8 225 aaPredicted RBP18.67■□□□□ 0.58
RNF4-209ENST00000507784 NR2E3Q9Y5X4 410 aa18.67■□□□□ 0.58
RNF4-209ENST00000507784 ARHGAP6O43182 974 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 AKR1B10O60218 316 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 B4GALT3O60512 393 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 CALCAP01258 141 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 ALDH2P05091 517 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 CYLC1P35663 651 aaPredicted RBP18.66■□□□□ 0.58
RNF4-209ENST00000507784 PRKCIP41743 596 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 BRCC3P46736 316 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 BPIFB4P59827 614 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 PTK2Q05397 1052 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 DSC1Q08554 894 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 RAD9BQ6WBX8 426 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 LRRC43Q8N309 656 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 C3orf58Q8NDZ4 430 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 OR6B3Q8NGW1 331 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 RSPH1Q8WYR4 309 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 COLEC11Q9BWP8 271 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 SNX25Q9H3E2 840 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 HCSTQ9UBK5 93 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 PYCARDQ9ULZ3 195 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 FAN1Q9Y2M0 1017 aa18.66■□□□□ 0.58
RNF4-209ENST00000507784 I3L4J1 428 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 TADA2AO75478 443 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 KIF4AO95239 1232 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 PDE6CP51160 858 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 ORC1Q13415 861 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 SOWAHAQ2M3V2 549 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 TIGD5Q53EQ6 642 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 ZNF571Q7Z3V5 609 aaPredicted RBP18.65■□□□□ 0.58
RNF4-209ENST00000507784 SLC47A2Q86VL8 602 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 TTC39CQ8N584 583 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 TOP6BLQ8N6T0 577 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 AGPAT1Q99943 283 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 TMEM175Q9BSA9 504 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 ZBED2Q9BTP6 218 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 PDCL3Q9H2J4 239 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 ACP6Q9NPH0 428 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 L1RE1Q9UN81 338 aa18.65■□□□□ 0.58
RNF4-209ENST00000507784 EPN1Q9Y6I3 576 aaPredicted RBP18.65■□□□□ 0.58
RNF4-209ENST00000507784 PTPRSQ13332 1948 aa18.64■□□□□ 0.58
RNF4-209ENST00000507784 SSU72P8A0A1W2PR75 194 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 F8W810 466 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 NRP1O14786 923 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 THAP12O43422 761 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 PAX3P23760 479 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 GNL1P36915 607 aaPredicted RBP18.64■□□□□ 0.57
RNF4-209ENST00000507784 SLC11A1P49279 550 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 NDST1P52848 882 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
RNF4-209ENST00000507784 BTG3Q14201 252 aaPredicted RBP18.64■□□□□ 0.57
RNF4-209ENST00000507784 DPH6Q7L8W6 267 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 VPS36Q86VN1 386 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 CCDC170Q8IYT3 715 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 ADGRF2Q8IZF7 708 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 SLC20A1Q8WUM9 679 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 HERVK_113Q902F9 699 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 YME1L1Q96TA2 773 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 MTIF3Q9H2K0 278 aaKnown RBP18.64■□□□□ 0.57
RNF4-209ENST00000507784 SPTLC3Q9NUV7 552 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 BARX2Q9UMQ3 279 aaPredicted RBP18.64■□□□□ 0.57
RNF4-209ENST00000507784 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 ZKSCAN5Q9Y2L8 839 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 TIMM13Q9Y5L4 95 aaPredicted RBP18.64■□□□□ 0.57
RNF4-209ENST00000507784 SLC4A7Q9Y6M7 1214 aa18.64■□□□□ 0.57
RNF4-209ENST00000507784 A8MXQ7 604 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 NT5C1B-RDH14C9J2C7 533 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 CILPO75339 1184 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 TACC1O75410 805 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 ITGB1P05556 798 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 PDGFRBP09619 1106 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 ODC1P11926 461 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 CD19P15391 556 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms