RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 AGAP9Q5VTM2 703 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 PPP1R32Q7Z5V6 425 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 LIX1LQ8IVB5 337 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 FAM186BQ8IYM0 893 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 ANKRD35Q8N283 1001 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 PDPRQ8NCN5 879 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 SCAMP4Q969E2 229 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 TRIM43Q96BQ3 446 aaPredicted RBP4.27□□□□□ -1.73
LSM6-205ENST00000507449 NMD3Q96D46 503 aaKnown RBP4.27□□□□□ -1.73
LSM6-205ENST00000507449 PHACTR3Q96KR7 559 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 CCDC138Q96M89 665 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 MNTQ99583 582 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 TEX101Q9BY14 249 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 CHMP4AQ9BY43 222 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 POGKQ9P215 609 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 HSFX1Q9UBD0 423 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 SRRDQ9UH36 339 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 AFF4Q9UHB7 1163 aaKnown RBP4.27□□□□□ -1.73
LSM6-205ENST00000507449 RIPOR2Q9Y4F9 1068 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 SNX13Q9Y5W8 968 aa4.27□□□□□ -1.73
LSM6-205ENST00000507449 A0A087WWL8 130 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 POM121BA6NF01 834 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 ZNF185O15231 689 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 KIF20AO95235 890 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 PIM1P11309 404 aaPredicted RBP4.26□□□□□ -1.73
LSM6-205ENST00000507449 RPL17P18621 184 aaKnown RBP4.26□□□□□ -1.73
LSM6-205ENST00000507449 FDXRP22570 491 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 TNFSF4P23510 183 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 MGAT1P26572 445 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 UCP3P55916 312 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 RPS16P62249 146 aaKnown RBP4.26□□□□□ -1.73
LSM6-205ENST00000507449 SLC13A2Q13183 592 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 DAG1Q14118 895 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 BOP1Q14137 746 aaKnown RBP4.26□□□□□ -1.73
LSM6-205ENST00000507449 HABP2Q14520 560 aaPredicted RBP4.26□□□□□ -1.73
LSM6-205ENST00000507449 KLHDC7AQ5VTJ3 777 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 ZNF783Q6ZMS7 281 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 LRRC55Q6ZSA7 311 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 USP37Q86T82 979 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 DPP9Q86TI2 863 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 SGMS1Q86VZ5 419 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 RHOT2Q8IXI1 618 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 SLC17A8Q8NDX2 589 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 OR6B3Q8NGW1 331 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 OR56A3Q8NH54 315 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 NUP133Q8WUM0 1156 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 KIAA1191Q96A73 305 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 MARS2Q96GW9 593 aaKnown RBP4.26□□□□□ -1.73
LSM6-205ENST00000507449 SUCLG2Q96I99 432 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 LRIG1Q96JA1 1093 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 TNIP3Q96KP6 325 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 GPR87Q9BY21 358 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 IMPG2Q9BZV3 1241 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 UNKQ9C0B0 810 aaKnown RBP4.26□□□□□ -1.73
LSM6-205ENST00000507449 SACM1LQ9NTJ5 587 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 ETAA1Q9NY74 926 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 CLCA2Q9UQC9 943 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 DMTF1Q9Y222 760 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 CHST2Q9Y4C5 530 aa4.26□□□□□ -1.73
LSM6-205ENST00000507449 XDHP47989 1333 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 ABHD14A-ACY1A0A1B0GW23 586 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 M0QYG6 137 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 FOXN3O00409 490 aaPredicted RBP4.25□□□□□ -1.73
LSM6-205ENST00000507449 IL18RAPO95256 599 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 GRPP07492 148 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 CKBP12277 381 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 IL1R1P14778 569 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 STT3AP46977 705 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 SLC11A2P49281 568 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 RNASE9P60153 205 aaKnown RBP4.25□□□□□ -1.73
LSM6-205ENST00000507449 HIBCHQ6NVY1 386 aaPredicted RBP4.25□□□□□ -1.73
LSM6-205ENST00000507449 CFAP52Q8N1V2 620 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 OR56A1Q8NGH5 318 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 DEPTORQ8TB45 409 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 EDAQ92838 391 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 PLCB1Q9NQ66 1216 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 GJB4Q9NTQ9 266 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 GPRC5BQ9NZH0 403 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 ST6GALNAC2Q9UJ37 374 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 CDYLQ9Y232 598 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.25□□□□□ -1.73
LSM6-205ENST00000507449 USP15Q9Y4E8 981 aaPredicted RBP4.25□□□□□ -1.73
LSM6-205ENST00000507449 PLEKHM1Q9Y4G2 1056 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 AATKQ6ZMQ8 1374 aa4.25□□□□□ -1.73
LSM6-205ENST00000507449 A0A1W2PPC4 97 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 AHRRA9YTQ3 701 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 DCLK1O15075 740 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 GNAI2P04899 355 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 THP07101 528 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 ELANEP08246 267 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 PARP1P09874 1014 aaKnown RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 IL6STP40189 918 aaPredicted RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 MAN2A2P49641 1150 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 HHEXQ03014 270 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 OCA2Q04671 838 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 OS9Q13438 667 aaPredicted RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 PMS2P11Q13670 270 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 RRP1BQ14684 758 aaKnown RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 R3HDM1Q15032 1099 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms