RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 CORO1BQ9BR76 489 aa19.14■□□□□ 0.65
SFXN1-207ENST00000507395 CBWD1Q9BRT8 395 aa19.14■□□□□ 0.65
SFXN1-207ENST00000507395 PLA2G2FQ9BZM2 168 aa19.14■□□□□ 0.65
SFXN1-207ENST00000507395 DNAJC25Q9H1X3 360 aa19.14■□□□□ 0.65
SFXN1-207ENST00000507395 DPP3Q9NY33 737 aa19.14■□□□□ 0.65
SFXN1-207ENST00000507395 GDE1Q9NZC3 331 aa19.14■□□□□ 0.65
SFXN1-207ENST00000507395 EXOC7Q9UPT5 735 aa19.14■□□□□ 0.65
SFXN1-207ENST00000507395 PRPF6O94906 941 aaKnown RBP19.13■□□□□ 0.65
SFXN1-207ENST00000507395 PDIA4P13667 645 aaKnown RBP19.13■□□□□ 0.65
SFXN1-207ENST00000507395 EHHADHQ08426 723 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 CENPPQ6IPU0 288 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 PHLDB3Q6NSJ2 640 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 NT5DC4Q86YG4 428 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 SAAL1Q96ER3 474 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 FAM213AQ9BRX8 229 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 CUEDC2Q9H467 287 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 FAM86C1Q9NVL1 165 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 DLGAP2Q9P1A6 1054 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 YIPF1Q9Y548 306 aa19.13■□□□□ 0.65
SFXN1-207ENST00000507395 MTMR11A4FU01 709 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 ECI2O75521 394 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 IL18RAPO95256 599 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 ODC1P11926 461 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 DUSP4Q13115 394 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 EPM2AIP1Q7L775 607 aaPredicted RBP19.12■□□□□ 0.65
SFXN1-207ENST00000507395 USP37Q86T82 979 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 TMC8Q8IU68 726 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 CCDC65Q8IXS2 484 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 CCDC105Q8IYK2 499 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 PGLYRP2Q96PD5 576 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 KXD1Q9BQD3 176 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 ARHGEF3Q9NR81 526 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 PCDHA7Q9UN72 937 aa19.12■□□□□ 0.65
SFXN1-207ENST00000507395 LDHAP00338 332 aaKnown RBP19.11■□□□□ 0.65
SFXN1-207ENST00000507395 TAF6P49848 677 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 STARD6P59095 220 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 FOXD4L6Q3SYB3 417 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-207ENST00000507395 TANGO2Q6ICL3 276 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 FOXD4L3Q6VB84 417 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-207ENST00000507395 TTC9BQ8N6N2 239 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 C1orf127Q8N9H9 656 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 ATAD1Q8NBU5 361 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 DHX58Q96C10 678 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 FAM84AQ96KN4 292 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 ZSWIM3Q96MP5 696 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 C7orf25Q9BPX7 421 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 DDX23Q9BUQ8 820 aaKnown RBP19.11■□□□□ 0.65
SFXN1-207ENST00000507395 ZCWPW1Q9H0M4 648 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 TMEM206Q9H813 350 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 TBC1D17Q9HA65 648 aa19.11■□□□□ 0.65
SFXN1-207ENST00000507395 GOLGA8IPA6NC78 632 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 SHISA7A6NL88 538 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 GOLGA8JA6NMD2 632 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 CYB561D2O14569 222 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 ZNF197O14709 1029 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 EXTL3O43909 919 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 FAM78AQ5JUQ0 283 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 RESP18Q5W5W9 173 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 ATL3Q6DD88 541 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 PDZD4Q76G19 769 aaPredicted RBP19.1■□□□□ 0.65
SFXN1-207ENST00000507395 LRRTM3Q86VH5 581 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 IQUBQ8NA54 791 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 ZNF507Q8TCN5 953 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 KCNG4Q8TDN1 519 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 ELSPBP1Q96BH3 223 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 ZNF512Q96ME7 567 aaPredicted RBP19.1■□□□□ 0.65
SFXN1-207ENST00000507395 ASB16Q96NS5 453 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 IRF2BPLQ9H1B7 796 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 PCIF1Q9H4Z3 704 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 RBAKQ9NYW8 714 aaPredicted RBP19.1■□□□□ 0.65
SFXN1-207ENST00000507395 HSFX1Q9UBD0 423 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 RCOR1Q9UKL0 485 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 SLC27A5Q9Y2P5 690 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 GTF3C3Q9Y5Q9 886 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 COL4A2P08572 1712 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 TCHHQ07283 1943 aa19.1■□□□□ 0.65
SFXN1-207ENST00000507395 NCANO14594 1321 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 KPNA7A9QM74 516 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 PROB1E7EW31 1015 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 POLR2DO15514 142 aaKnown RBP19.09■□□□□ 0.65
SFXN1-207ENST00000507395 GLULP15104 373 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 GJA1P17302 382 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 CASP1P29466 404 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 WSCD1Q658N2 575 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 SYCP3Q8IZU3 236 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 DTWD2Q8NBA8 298 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 SPRYD3Q8NCJ5 442 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 SHKBP1Q8TBC3 707 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 ATOH1Q92858 354 aaPredicted RBP19.09■□□□□ 0.65
SFXN1-207ENST00000507395 PYM1Q9BRP8 204 aaKnown RBP19.09■□□□□ 0.65
SFXN1-207ENST00000507395 LRRC27Q9C0I9 530 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 DSEQ9UL01 958 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 ZDHHC9Q9Y397 364 aa19.09■□□□□ 0.65
SFXN1-207ENST00000507395 PTPRJQ12913 1337 aa19.08■□□□□ 0.65
SFXN1-207ENST00000507395 EIF3DO15371 548 aaKnown RBP eCLIP19.08■□□□□ 0.64
SFXN1-207ENST00000507395 TGFB1I1O43294 461 aa19.08■□□□□ 0.64
SFXN1-207ENST00000507395 SOAT2O75908 522 aa19.08■□□□□ 0.64
SFXN1-207ENST00000507395 DNM1Q05193 864 aaKnown RBP19.08■□□□□ 0.64
SFXN1-207ENST00000507395 SNW1Q13573 536 aaKnown RBP19.08■□□□□ 0.64
SFXN1-207ENST00000507395 SLC44A4Q53GD3 710 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms