RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 GOLGA8FQ08AF8 430 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 GOLGA8DPQ0D2H9 430 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 DRAP1Q14919 205 aaPredicted RBP15.2■□□□□ 0.02
RNF4-208ENST00000507247 ARHGAP44Q17R89 818 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 SOWAHAQ2M3V2 549 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 LIMS2Q7Z4I7 341 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 SPRED2Q7Z698 418 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 DRC7Q8IY82 874 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 TDHQ8IZJ6 230 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 CPLX3Q8WVH0 158 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 CLP1Q92989 425 aaKnown RBP15.2■□□□□ 0.02
RNF4-208ENST00000507247 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 L1RE1Q9UN81 338 aa15.2■□□□□ 0.02
RNF4-208ENST00000507247 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
RNF4-208ENST00000507247 A0A1W2PQJ5 194 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 M0QZQ0 153 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 TADA2AO75478 443 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 EFEMP2O95967 443 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 P4HA1P13674 534 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 ACO1P21399 889 aaKnown RBP15.19■□□□□ 0.02
RNF4-208ENST00000507247 MFAP3P55082 362 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 TRIM14Q14142 442 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 FUT10Q6P4F1 479 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 DSTYKQ6XUX3 929 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 CACNA2D4Q7Z3S7 1137 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 KBTBD7Q8WVZ9 684 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 SHC3Q92529 594 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 IGSF21Q96ID5 467 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 FAXDC2Q96IV6 333 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 PDLIM2Q96JY6 352 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 MMS19Q96T76 1030 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 MRPL45Q9BRJ2 306 aaKnown RBP15.19■□□□□ 0.02
RNF4-208ENST00000507247 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 GPR62Q9BZJ7 368 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 CAPN11Q9UMQ6 739 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 DAAM1Q9Y4D1 1078 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 NME7Q9Y5B8 376 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 PCDHA11Q9Y5I1 949 aa15.19■□□□□ 0.02
RNF4-208ENST00000507247 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.18■□□□□ 0.02
RNF4-208ENST00000507247 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.18■□□□□ 0.02
RNF4-208ENST00000507247 F8VZ95 297 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 HCRTO43612 131 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 CA3P07451 260 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 CD58P19256 250 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 PAX3P23760 479 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 TKTP29401 623 aaKnown RBP15.18■□□□□ 0.02
RNF4-208ENST00000507247 WSCD1Q658N2 575 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 E4F1Q66K89 784 aaPredicted RBP15.18■□□□□ 0.02
RNF4-208ENST00000507247 PDXDC1Q6P996 788 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 ENOSF1Q7L5Y1 443 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 PPFIBP1Q86W92 1011 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 OSTM1Q86WC4 334 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 GPIHBP1Q8IV16 184 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 RNF168Q8IYW5 571 aaPredicted RBP15.18■□□□□ 0.02
RNF4-208ENST00000507247 ADGRF2Q8IZF7 708 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 TOP6BLQ8N6T0 577 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 APPL2Q8NEU8 664 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 IQCDQ96DY2 449 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 FAM81BQ96LP2 452 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 PBX4Q9BYU1 374 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 EDEM3Q9BZQ6 932 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 CYP3A43Q9HB55 503 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 CISHQ9NSE2 258 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 SPG21Q9NZD8 308 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 HMGXB4Q9UGU5 601 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 PCDHB8Q9UN66 801 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 TIMM13Q9Y5L4 95 aaPredicted RBP15.18■□□□□ 0.02
RNF4-208ENST00000507247 LAMA3Q16787 3333 aa15.18■□□□□ 0.02
RNF4-208ENST00000507247 A0A1W2PPC1 479 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 FOXN3O00409 490 aaPredicted RBP15.17■□□□□ 0.02
RNF4-208ENST00000507247 HUS1O60921 280 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 MFAP3LO75121 409 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 TACC1O75410 805 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 ODC1P11926 461 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
RNF4-208ENST00000507247 INCA1Q0VD86 236 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 DPH6Q7L8W6 267 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 TAS1R1Q7RTX1 841 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 WHAMMQ8TF30 809 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 ANP32BQ92688 251 aaKnown RBP15.17■□□□□ 0.02
RNF4-208ENST00000507247 B3GALT6Q96L58 329 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 SPAG5Q96R06 1193 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 TWNKQ96RR1 684 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 C17orf80Q9BSJ5 609 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 AAASQ9NRG9 546 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 LUC7L2Q9Y383 392 aaKnown RBP15.17■□□□□ 0.02
RNF4-208ENST00000507247 PCDHB4Q9Y5E5 795 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 PCDHB12Q9Y5F1 795 aa15.17■□□□□ 0.02
RNF4-208ENST00000507247 SF3B1O75533 1304 aaKnown RBP eCLIP15.17■□□□□ 0.021e-6■■■■■ 109.1
RNF4-208ENST00000507247 ATG2AQ2TAZ0 1938 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 GABRDO14764 452 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 CILPO75339 1184 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 CYP11A1P05108 521 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 TYMPP19971 482 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 WARSP23381 471 aaKnown RBP15.16■□□□□ 0.02
RNF4-208ENST00000507247 CTNNB1P35222 781 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms