RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MTCH2Q9Y6C9 303 aa13.8□□□□□ -0.2
TCOF1-210ENST00000506767 ARHGEF37A1IGU5 675 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 C2orf71A6NGG8 1288 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 HIDE1A8MVS5 230 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 TBC1D4O60343 1298 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 CXCL14O95715 111 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 URODP06132 367 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 FAM163BP0C2L3 166 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 ODC1P11926 461 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 ATP1A3P13637 1013 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 PRKCSHP14314 528 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 MYL7Q01449 175 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 BMS1Q14692 1282 aaKnown RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 ZNF699Q32M78 642 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 WDR72Q3MJ13 1102 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 PLPP4Q5VZY2 271 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 CEP57Q86XR8 500 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 APPL2Q8NEU8 664 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 AUTS2Q8WXX7 1259 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 GAS2L1Q99501 681 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 APOBEC3GQ9HC16 384 aaKnown RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 ENTPD7Q9NQZ7 604 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 MRPL17Q9NRX2 175 aaKnown RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 DSEQ9UL01 958 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 PCDHGC5Q9Y5F6 944 aa13.79□□□□□ -0.2
TCOF1-210ENST00000506767 TIMM13Q9Y5L4 95 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-210ENST00000506767 GABRDO14764 452 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 HUS1O60921 280 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 CDK11BP21127 795 aaKnown RBP13.78□□□□□ -0.2
TCOF1-210ENST00000506767 COPB1P53618 953 aaKnown RBP13.78□□□□□ -0.2
TCOF1-210ENST00000506767 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
TCOF1-210ENST00000506767 CETN1Q12798 172 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 PRSS55Q6UWB4 352 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-210ENST00000506767 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 TMEM86AQ8N2M4 240 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 PDCL2Q8N4E4 241 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 MYLIPQ8WY64 445 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 RIN2Q8WYP3 895 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-210ENST00000506767 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.78□□□□□ -0.2
TCOF1-210ENST00000506767 TAB2Q9NYJ8 693 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 MTRRQ9UBK8 725 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 NXF1Q9UBU9 619 aaKnown RBP13.78□□□□□ -0.2
TCOF1-210ENST00000506767 POLIQ9UNA4 740 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 BACE2Q9Y5Z0 518 aa13.78□□□□□ -0.2
TCOF1-210ENST00000506767 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-210ENST00000506767 H7C4K7 107 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 C2CD2LO14523 706 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 TACC1O75410 805 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 CNPP09543 421 aaKnown RBP13.77□□□□□ -0.21
TCOF1-210ENST00000506767 ASPAP45381 313 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 TNNC1P63316 161 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 CREMQ03060 361 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 YWHAHQ04917 246 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-210ENST00000506767 PSMD5Q16401 504 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 WDR44Q5JSH3 913 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 OVOS1Q6IE37 1185 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-210ENST00000506767 ADGRD2Q7Z7M1 963 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 ANKRD20A12PQ8NF67 263 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 TATDN2Q93075 761 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 KLHL5Q96PQ7 755 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 RTP3Q9BQQ7 232 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 CLSTN3Q9BQT9 956 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 OXCT2Q9BYC2 517 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-210ENST00000506767 BCO2Q9BYV7 579 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 IMPG2Q9BZV3 1241 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 VPS16Q9H269 839 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 NSUN3Q9H649 340 aaKnown RBP13.77□□□□□ -0.21
TCOF1-210ENST00000506767 CDH23Q9H251 3354 aa13.77□□□□□ -0.21
TCOF1-210ENST00000506767 MYO9BQ13459 2157 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 GOLGA6L19H0YKK7 550 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 TEX28O15482 410 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 CSPG5O95196 566 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 P4HA1P13674 534 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 SLC9A1P19634 815 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 IGFBP4P22692 258 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 WARSP23381 471 aaKnown RBP13.76□□□□□ -0.21
TCOF1-210ENST00000506767 KCNMA1Q12791 1236 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 DUSP6Q16828 381 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 ZNF280DQ6N043 979 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 DPY19L2P1Q6NXN4 242 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms