RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KIAA1586Q9HCI6 787 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 PDE11AQ9HCR9 933 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 MAN1C1Q9NR34 630 aa14.17□□□□□ -0.14
TCOF1-209ENST00000506630 MYO10Q9HD67 2058 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 STK25O00506 426 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 TGM5O43548 720 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 SMC2O95347 1197 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 TMEM191BP0C7N4 346 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 SPATA31D3P0C874 917 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 NPR3P17342 541 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 RFX1P22670 979 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 SURF1Q15526 300 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 SNRNP35Q16560 246 aaKnown RBP14.16□□□□□ -0.14
TCOF1-209ENST00000506630 VARS2Q5ST30 1063 aaKnown RBP14.16□□□□□ -0.14
TCOF1-209ENST00000506630 ELMSAN1Q6PJG2 1045 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 SPATA31D4Q6ZUB0 917 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 C12orf56Q8IXR9 622 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 SIX5Q8N196 739 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 ANKRD36BP1Q96IX9 119 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 IPO9Q96P70 1041 aaKnown RBP14.16□□□□□ -0.14
TCOF1-209ENST00000506630 CLSTN3Q9BQT9 956 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 MTMR12Q9C0I1 747 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 KCTD10Q9H3F6 313 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 KCNK12Q9HB15 430 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 RMND1Q9NWS8 449 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 IGSF9Q9P2J2 1179 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 MTRRQ9UBK8 725 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 DUSP12Q9UNI6 340 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 MAPK8IP1Q9UQF2 711 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 CDY1Q9Y6F8 540 aa14.16□□□□□ -0.14
TCOF1-209ENST00000506630 ANO9A1A5B4 782 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 H7C4K7 107 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 PIRO00625 290 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 PDXKO00764 312 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 CALUO43852 315 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-209ENST00000506630 EXOC3O60645 756 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 LMNAP02545 664 aaKnown RBP14.15□□□□□ -0.14
TCOF1-209ENST00000506630 ITGB3P05106 788 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 OR1D2P34982 312 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 TAF6P49848 677 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 LILRA4P59901 499 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 UBE2HP62256 183 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 ZNF280DQ6N043 979 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 SMYD4Q8IYR2 804 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-209ENST00000506630 APPL2Q8NEU8 664 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 FAM84AQ96KN4 292 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 ZNF560Q96MR9 790 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 FNBP1Q96RU3 617 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 DPP7Q9UHL4 492 aa14.15□□□□□ -0.14
TCOF1-209ENST00000506630 DOCK8Q8NF50 2099 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 M0QZQ0 153 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 ADAM12O43184 909 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 PRPF40AO75400 957 aaKnown RBP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 TNNC2P02585 160 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 NR3C1P04150 777 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 KRT19P08727 400 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 DLATP10515 647 aaKnown RBP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 POLR2BP30876 1174 aaKnown RBP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 AARSP49588 968 aaKnown RBP eCLIP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 YWHAHQ04917 246 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 CYP24A1Q07973 514 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 SV2CQ496J9 727 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 CTXN3Q4LDR2 81 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 C15orf39Q6ZRI6 1047 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 USP37Q86T82 979 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 GUF1Q8N442 669 aaKnown RBP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 C1orf127Q8N9H9 656 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 SENP8Q96LD8 212 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 GSDMAQ96QA5 445 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 CGRRF1Q99675 332 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 FBXW11Q9UKB1 542 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 R3HCC1Q9Y3T6 440 aaKnown RBP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 PCDHA5Q9Y5H7 936 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 TIMM13Q9Y5L4 95 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-209ENST00000506630 BACE2Q9Y5Z0 518 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 PTPRJQ12913 1337 aa14.14□□□□□ -0.15
TCOF1-209ENST00000506630 MYH10P35580 1976 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 ARHGEF37A1IGU5 675 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 SPTLC1O15269 473 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 ODC1P11926 461 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 TNNI1P19237 187 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 ARPP19P56211 112 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 BFSP1Q12934 665 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 PSMD6Q15008 389 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 DUOXA2Q1HG44 320 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 LIN9Q5TKA1 542 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-209ENST00000506630 CEP135Q66GS9 1140 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 RSPO2Q6UXX9 243 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-209ENST00000506630 WDR49Q8IV35 697 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 OR5B17Q8NGF7 314 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 HDAC7Q8WUI4 952 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 CCDC127Q96BQ5 260 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 PLEKHA4Q9H4M7 779 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 INTS13Q9NVM9 706 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 WNT16Q9UBV4 365 aa14.13□□□□□ -0.15
TCOF1-209ENST00000506630 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms