RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SFSWAPQ12872 951 aaKnown RBP16.78■□□□□ 0.28
SCLT1-208ENST00000506368 ALCAMQ13740 583 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 TNIP1Q15025 636 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 TBCCQ15814 346 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 DNAL1Q4LDG9 190 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 AAGABQ6PD74 315 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 ALDH16A1Q8IZ83 802 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 MYCT1Q8N699 235 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 SPOCK2Q92563 424 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 MAML3Q96JK9 1138 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 ECSITQ9BQ95 431 aa16.78■□□□□ 0.28
SCLT1-208ENST00000506368 FOXO6A8MYZ6 492 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 STAT3P40763 770 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 SLC1A5Q15758 541 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 CCDC142Q17RM4 750 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 EPC2Q52LR7 807 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 ZNF720Q7Z2F6 126 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 RANBP17Q9H2T7 1088 aaKnown RBP16.77■□□□□ 0.28
SCLT1-208ENST00000506368 NDE1Q9NXR1 346 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 TAS2R1Q9NYW7 299 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 HEY2Q9UBP5 337 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 SAP30BPQ9UHR5 308 aaKnown RBP16.77■□□□□ 0.28
SCLT1-208ENST00000506368 GRID1Q9ULK0 1009 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.28
SCLT1-208ENST00000506368 CFAP69A5D8W1 941 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 RSPH10B2B2RC85 870 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 F5H6K3 240 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 PSTPIP1O43586 416 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 PPP1R11O60927 126 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-208ENST00000506368 RSPH10BP0C881 870 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 PYGBP11216 843 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 KLRC2P26717 231 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 PHBP35232 272 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 CDK18Q07002 472 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 KLF1Q13351 362 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-208ENST00000506368 PKN2Q16513 984 aaKnown RBP16.77■□□□□ 0.27
SCLT1-208ENST00000506368 DRICH1Q6PGQ1 229 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-208ENST00000506368 CHSY1Q86X52 802 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 C12orf56Q8IXR9 622 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 HIC2Q96JB3 615 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 FNBP1Q96RU3 617 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 PCDHB18PQ96TA0 734 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 ARL8BQ9NVJ2 186 aa16.77■□□□□ 0.27
SCLT1-208ENST00000506368 A0A1B0GVG6 124 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 DNALI1O14645 258 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-208ENST00000506368 ZSCAN9O15535 394 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-208ENST00000506368 CSDE1O75534 798 aaKnown RBP16.76■□□□□ 0.27
SCLT1-208ENST00000506368 TMCC1O94876 653 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 ANPEPP15144 967 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 CIITAP33076 1130 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 PGM1P36871 562 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 RGS2P41220 211 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
SCLT1-208ENST00000506368 ZBTB16Q05516 673 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 ADCY1Q08828 1119 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 KCNA1Q09470 495 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 THOC5Q13769 683 aaKnown RBP16.76■□□□□ 0.27
SCLT1-208ENST00000506368 RASA3Q14644 834 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 MORF4L2Q15014 288 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 GPR162Q16538 588 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 CLEC16AQ2KHT3 1053 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 TMEM259Q4ZIN3 620 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 TMCO4Q5TGY1 634 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 ACAD10Q6JQN1 1059 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 MANSC1Q9H8J5 431 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 C17orf75Q9HAS0 396 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 ALOX15BO15296 676 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 TRIM49P0CI25 452 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 TRIM49CP0CI26 452 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 MAPK4P31152 587 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 MFAP3P55082 362 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 MCCD1P59942 119 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-208ENST00000506368 MYBPC3Q14896 1274 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 EFHC2Q5JST6 749 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 MAP3K21Q5TCX8 1036 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 C1orf186Q6ZWK4 172 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 FAM178BQ8IXR5 827 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 SAYSD1Q9NPB0 183 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 DNAJC17Q9NVM6 304 aaKnown RBP16.76■□□□□ 0.27
SCLT1-208ENST00000506368 FER1L6Q2WGJ9 1857 aa16.76■□□□□ 0.27
SCLT1-208ENST00000506368 LOXHD1Q8IVV2 1947 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 MEIS1O00470 390 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 TSHRP16473 764 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 BTDP43251 543 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 GEMIN4P57678 1058 aaKnown RBP16.75■□□□□ 0.27
SCLT1-208ENST00000506368 RTP1P59025 263 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 ACTR3P61158 418 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 IRX4P78413 519 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 FMO1Q01740 532 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 GRM2Q14416 872 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 KLHL38Q2WGJ6 581 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 RBM26Q5T8P6 1007 aaKnown RBP16.75■□□□□ 0.27
SCLT1-208ENST00000506368 CYP4F22Q6NT55 531 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 IZUMO2Q6UXV1 221 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 CENPUQ71F23 418 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 MYLK4Q86YV6 388 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms