RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 GTSE1Q9NYZ3 720 aa8.98□□□□□ -0.97
SNF8-204ENST00000506104 CNTN3Q9P232 1028 aa8.98□□□□□ -0.97
SNF8-204ENST00000506104 RBM19Q9Y4C8 960 aaKnown RBP8.98□□□□□ -0.97
SNF8-204ENST00000506104 PCDHB6Q9Y5E3 794 aa8.98□□□□□ -0.97
SNF8-204ENST00000506104 STK24Q9Y6E0 443 aa8.98□□□□□ -0.97
SNF8-204ENST00000506104 GREB1Q4ZG55 1949 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 SHISA7A6NL88 538 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 SLC30A4O14863 429 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 XPOTO43592 962 aaKnown RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 MOSPD3O75425 235 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 TOM1L1O75674 476 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 MUTP22033 750 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 HOXC13P31276 330 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 TNFSF9P41273 254 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNF8-204ENST00000506104 TNK2Q07912 1038 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 PSMD2Q13200 908 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 MRPL58Q14197 206 aaKnown RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 SF3A2Q15428 464 aaKnown RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 SLC10A6Q3KNW5 377 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 SLC39A12Q504Y0 691 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 TXNDC11Q6PKC3 985 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 ALKAL1Q6UXT8 129 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 DTHD1Q6ZMT9 781 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 LONP2Q86WA8 852 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 FAM160A2Q8N612 972 aaPredicted RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 TTC9BQ8N6N2 239 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 ATAD1Q8NBU5 361 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 NOC3LQ8WTT2 800 aaKnown RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 NELL1Q92832 810 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 TMEM209Q96SK2 561 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 LPIN3Q9BQK8 851 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 IER2Q9BTL4 223 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 ARRDC1-AS1Q9H2J1 176 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 C8orf33Q9H7E9 229 aaPredicted RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 RPF1Q9H9Y2 349 aaKnown RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 PTPRHQ9HD43 1115 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 UBQLN1Q9UMX0 589 aaKnown RBP8.97□□□□□ -0.97
SNF8-204ENST00000506104 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 SLC8A2Q9UPR5 921 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 NCANO14594 1321 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 CACNA1AO00555 2505 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 NCOR2Q9Y618 2525 aa8.97□□□□□ -0.97
SNF8-204ENST00000506104 OR6C75A6NL08 312 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 LACTBL1A8MY62 500 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 K7ENM7 598 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 CHADO15335 359 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 MICAL2O94851 1124 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 ADRB1P08588 477 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 ODC1P11926 461 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 TDGF1P13385 188 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 PLS3P13797 630 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 CTHP32929 405 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 ST3GAL1Q11201 340 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 ORC2Q13416 577 aaPredicted RBP8.96□□□□□ -0.98
SNF8-204ENST00000506104 GAS6Q14393 721 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 CSRP2Q16527 193 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 ARHGAP29Q52LW3 1261 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 XKR4Q5GH76 650 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 DGKKQ5KSL6 1271 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 KCNK18Q7Z418 384 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 DNAJB7Q7Z6W7 309 aaPredicted RBP8.96□□□□□ -0.98
SNF8-204ENST00000506104 ITIH5Q86UX2 942 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 TTC30AQ86WT1 665 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 METTL23Q86XA0 190 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 DAW1Q8N136 415 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 BEST2Q8NFU1 509 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 BPIFB1Q8TDL5 484 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 MSTO1Q9BUK6 570 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 CRISPLD1Q9H336 500 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 SMOC1Q9H4F8 434 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 C2orf42Q9NWW7 574 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 THG1LQ9NWX6 298 aaKnown RBP8.96□□□□□ -0.98
SNF8-204ENST00000506104 ARHGAP28Q9P2N2 729 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 MAGED2Q9UNF1 606 aaPredicted RBP8.96□□□□□ -0.98
SNF8-204ENST00000506104 SCN1AP35498 2009 aa8.96□□□□□ -0.98
SNF8-204ENST00000506104 DENND4CQ5VZ89 1909 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 TPRP12270 2363 aaKnown RBP8.95□□□□□ -0.98
SNF8-204ENST00000506104 MTMR11A4FU01 709 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 VWA3AA6NCI4 1184 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 PPEF2O14830 753 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 HNRNPDLO14979 420 aaKnown RBP8.95□□□□□ -0.98
SNF8-204ENST00000506104 MEFVO15553 781 aaPredicted RBP8.95□□□□□ -0.98
SNF8-204ENST00000506104 EXTL3O43909 919 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 RPP40O75818 363 aaKnown RBP8.95□□□□□ -0.98
SNF8-204ENST00000506104 FAM13AO94988 1023 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 CLTAP09496 248 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 PLA2G4BP0C869 781 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 TGM1P22735 817 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 U2AF2P26368 475 aaKnown RBP eCLIP8.95□□□□□ -0.988e-7■□□□□ 10.3
SNF8-204ENST00000506104 TRAPPC10P48553 1259 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 HMGN5P82970 282 aaKnown RBP8.95□□□□□ -0.98
SNF8-204ENST00000506104 BFSP1Q12934 665 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 MAPK7Q13164 816 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 GPR17Q13304 367 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 PDIA5Q14554 519 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 PTPAQ15257 358 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 ITPRIPL2Q3MIP1 535 aa8.95□□□□□ -0.98
SNF8-204ENST00000506104 CC2D1AQ6P1N0 951 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms