RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 KANSL1LA0AUZ9 987 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 CLIC2O15247 247 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 CALUO43852 315 aaPredicted RBP17.03■□□□□ 0.32
PDCD6-203ENST00000505526 TADA2AO75478 443 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 CAVIN2O95810 425 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 ARF4P18085 180 aaPredicted RBP17.03■□□□□ 0.32
PDCD6-203ENST00000505526 AKAP5P24588 427 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 NTHL1P78549 312 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 ZNF528Q3MIS6 628 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 TTI2Q6NXR4 508 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 PRSS55Q6UWB4 352 aaPredicted RBP17.03■□□□□ 0.32
PDCD6-203ENST00000505526 GOLGA5Q8TBA6 731 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 CBX8Q9HC52 389 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 SPATA6Q9NWH7 488 aaPredicted RBP17.03■□□□□ 0.32
PDCD6-203ENST00000505526 ANKFY1Q9P2R3 1169 aa17.03■□□□□ 0.32
PDCD6-203ENST00000505526 LAMTOR5O43504 91 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 TOM1L1O75674 476 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 SNRPFP62306 86 aaKnown RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 GRIK3Q13003 919 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 RTP2Q5QGT7 225 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 VARS2Q5ST30 1063 aaKnown RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 MTSS1LQ765P7 747 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 CDR2LQ86X02 465 aaPredicted RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 AOPEPQ8N6M6 819 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 BORCS6Q96GS4 357 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 ZBTB45Q96K62 511 aaPredicted RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 DUSP9Q99956 384 aaKnown RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 CBWD1Q9BRT8 395 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 DDX23Q9BUQ8 820 aaKnown RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 KLK14Q9P0G3 267 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 FBXW11Q9UKB1 542 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 FBXO4Q9UKT5 387 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 MTF2Q9Y483 593 aaPredicted RBP17.02■□□□□ 0.32
PDCD6-203ENST00000505526 CACNA1IQ9P0X4 2223 aa17.02■□□□□ 0.32
PDCD6-203ENST00000505526 NR3C1P04150 777 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 HNRNPA1P09651 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDCD6-203ENST00000505526 ADSSP30520 456 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.313e-6■□□□□ 9.6
PDCD6-203ENST00000505526 MYL5Q02045 173 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 PRKCQQ04759 706 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 UBXN2BQ14CS0 331 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 MLF2Q15773 248 aaPredicted RBP17.01■□□□□ 0.31
PDCD6-203ENST00000505526 TPD52L1Q16890 204 aaPredicted RBP17.01■□□□□ 0.31
PDCD6-203ENST00000505526 EDRF1Q3B7T1 1238 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 SLC44A4Q53GD3 710 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 LIN9Q5TKA1 542 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 EEF1DP3Q658K8 133 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 ARMCX5Q6P1M9 558 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 FOXR2Q6PJQ5 311 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 GAS2L3Q86XJ1 694 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 DHX40Q8IX18 779 aaKnown RBP17.01■□□□□ 0.31
PDCD6-203ENST00000505526 CSGALNACT2Q8N6G5 542 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 ENOX1Q8TC92 643 aaKnown RBP17.01■□□□□ 0.31
PDCD6-203ENST00000505526 POMGNT1Q8WZA1 660 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 FGF13Q92913 245 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 EEF2KMTQ96G04 330 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 TCHPQ9BT92 498 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 PCIF1Q9H4Z3 704 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 PDZD7Q9H5P4 517 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 NCDNQ9UBB6 729 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 CACNG4Q9UBN1 327 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 PARP2Q9UGN5 583 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 SF3B1O75533 1304 aaKnown RBP eCLIP17.01■□□□□ 0.314e-8■■■■■ 68.9
PDCD6-203ENST00000505526 COL4A3Q01955 1670 aa17.01■□□□□ 0.31
PDCD6-203ENST00000505526 A0A1B0GUA9 196 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 FAM170BA6NMN3 283 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 SPTLC1O15269 473 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 CLDN3O15551 220 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 NPTXRO95502 500 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 HARSP12081 509 aaKnown RBP17■□□□□ 0.31
PDCD6-203ENST00000505526 PROZP22891 400 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 NR2F2P24468 414 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 CYP2J2P51589 502 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 CSTF1Q05048 431 aaKnown RBP17■□□□□ 0.31
PDCD6-203ENST00000505526 HSP90AA2PQ14568 343 aaPredicted RBP17■□□□□ 0.31
PDCD6-203ENST00000505526 IQCB1Q15051 598 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 ZNF568Q3ZCX4 644 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 PPM1LQ5SGD2 360 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 SPATA1Q5VX52 437 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 SLFN12LQ6IEE8 588 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 SLC27A1Q6PCB7 646 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 MPZL3Q6UWV2 235 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 RNF214Q8ND24 703 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 CLSTN3Q9BQT9 956 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 PAAF1Q9BRP4 392 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 OSBPL6Q9BZF3 934 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 HAPLN2Q9GZV7 340 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 PTPRHQ9HD43 1115 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 MIA3Q5JRA6 1907 aa17■□□□□ 0.31
PDCD6-203ENST00000505526 BECN2A8MW95 431 aa16.99■□□□□ 0.31
PDCD6-203ENST00000505526 ABLIM1O14639 778 aa16.99■□□□□ 0.31
PDCD6-203ENST00000505526 N4BP3O15049 544 aa16.99■□□□□ 0.31
PDCD6-203ENST00000505526 CCL16O15467 120 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms