RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 ZMAT2Q96NC0 199 aaKnown RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 RPS6KC1Q96S38 1066 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 ARID3AQ99856 593 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 GPR88Q9GZN0 384 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 NHEJ1Q9H9Q4 299 aaPredicted RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 APOBEC3GQ9HC16 384 aaKnown RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 RNF19AQ9NV58 838 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 AIPL1Q9NZN9 384 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 ARHGAP20Q9P2F6 1191 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 SIX4Q9UIU6 781 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 ITGA11Q9UKX5 1188 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 UBQLN1Q9UMX0 589 aaKnown RBP10.03□□□□□ -0.8
TPM3-218ENST00000505010 NUB1Q9Y5A7 615 aa10.03□□□□□ -0.8
TPM3-218ENST00000505010 SMIM28A0A1B0GU29 152 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 MEIS3P2A8K0S8 358 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 FOXN3O00409 490 aaPredicted RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 CCP110O43303 1012 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 AKR1B10O60218 316 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 NBNO60934 754 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 OFD1O75665 1012 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 NDUFA10O95299 355 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 IPO7O95373 1038 aaKnown RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 CST3P01034 146 aaPredicted RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 CCDC175P0C221 793 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 CCDC172P0C7W6 258 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 SKIP12755 728 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 IL9P15248 144 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 KCNE1P15382 129 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 TBXAS1P24557 533 aaPredicted RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 KIF11P52732 1056 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 RBP5P82980 135 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 ZNF667Q5HYK9 610 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 HGSNATQ68CP4 663 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 ALKAL1Q6UXT8 129 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 MRPL10Q7Z7H8 261 aaKnown RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 CCAR2Q8N163 923 aaKnown RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 ACRBPQ8NEB7 543 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 TET1Q8NFU7 2136 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 GDPD5Q8WTR4 605 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 LINC01599Q8WXQ3 324 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 SHC3Q92529 594 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 SEPT8Q92599 483 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 TAF4BQ92750 862 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 PGBD4Q96DM1 585 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 CCDC42Q96M95 316 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 ZFP42Q96MM3 310 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 GAD1Q99259 594 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 HAUS4Q9H6D7 363 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 SPTLC3Q9NUV7 552 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 TRMT1Q9NXH9 659 aaKnown RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 POLIQ9UNA4 740 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 AGAP1Q9UPQ3 857 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 PPP2R2CQ9Y2T4 447 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 EPN1Q9Y6I3 576 aaPredicted RBP10.02□□□□□ -0.81
TPM3-218ENST00000505010 CFAP54Q96N23 3096 aa10.02□□□□□ -0.81
TPM3-218ENST00000505010 TSC2P49815 1807 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 A0A0U1RQF3 1178 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 SSU72P8A0A1W2PR75 194 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 ARL5CA6NH57 179 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 USP27XA6NNY8 438 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 PTGESO14684 152 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 ZSCAN12O43309 604 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 ZNF623O75123 536 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 BAIAP3O94812 1187 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 ATF7P17544 494 aaPredicted RBP10.01□□□□□ -0.81
TPM3-218ENST00000505010 CD58P19256 250 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 ATICP31939 592 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 PRKCIP41743 596 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 ASPAP45381 313 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 SCNN1GP51170 649 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 PTK2Q05397 1052 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
TPM3-218ENST00000505010 SPA17Q15506 151 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 PLEKHG4Q58EX7 1191 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 XKR4Q5GH76 650 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 IRF2BP2Q7Z5L9 587 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 SPRED2Q7Z698 418 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 VPS36Q86VN1 386 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 ECHDC2Q86YB7 292 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 FAM71AQ8IYT1 594 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 CCDC170Q8IYT3 715 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 HPDLQ96IR7 371 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 PPP1R13BQ96KQ4 1090 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.01□□□□□ -0.81
TPM3-218ENST00000505010 FTHL17Q9BXU8 183 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 XYLT2Q9H1B5 865 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 RSAD1Q9HA92 442 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 RGS18Q9NS28 235 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 NXF1Q9UBU9 619 aaKnown RBP10.01□□□□□ -0.81
TPM3-218ENST00000505010 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 INPP5FQ9Y2H2 1132 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 GIT1Q9Y2X7 761 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 PCDHB4Q9Y5E5 795 aa10.01□□□□□ -0.81
TPM3-218ENST00000505010 BZW2Q9Y6E2 419 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms