RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 GDAP2Q9NXN4 497 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 CXXC1Q9P0U4 656 aaPredicted RBP12.15□□□□□ -0.46
TRIO-206ENST00000504606 SLC4A7Q9Y6M7 1214 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 DNAH12Q6ZR08 3092 aa12.15□□□□□ -0.46
TRIO-206ENST00000504606 COL4A6Q14031 1691 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 CYB561D2O14569 222 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 NRP1O14786 923 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 CYP26A1O43174 497 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 HUS1O60921 280 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 KIF4AO95239 1232 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 ALDH2P05091 517 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 SERPING1P05155 500 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 FECHP22830 423 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 PAX3P23760 479 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 BRCC3P46736 316 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 SLC11A1P49279 550 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 CCZ1BP86790 482 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 CCZ1P86791 482 aaPredicted RBP12.14□□□□□ -0.47
TRIO-206ENST00000504606 KLHL30Q0D2K2 578 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
TRIO-206ENST00000504606 TIGD5Q53EQ6 642 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 SPOUT1Q5T280 376 aaKnown RBP12.14□□□□□ -0.47
TRIO-206ENST00000504606 CYP26C1Q6V0L0 522 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 IRF2BP2Q7Z5L9 587 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 TMTC1Q8IUR5 882 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 TMEM139Q8IV31 216 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 TOP6BLQ8N6T0 577 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 RBBP8NLQ8NC74 664 aaPredicted RBP12.14□□□□□ -0.47
TRIO-206ENST00000504606 APPL2Q8NEU8 664 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 SENP8Q96LD8 212 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 SLC9A7Q96T83 725 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 CHP1Q99653 195 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 MRPL45Q9BRJ2 306 aaKnown RBP12.14□□□□□ -0.47
TRIO-206ENST00000504606 COLEC11Q9BWP8 271 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
TRIO-206ENST00000504606 FAN1Q9Y2M0 1017 aa12.14□□□□□ -0.47
TRIO-206ENST00000504606 F8W810 466 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 TMEM189-UBE2V1I3L0A0 370 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 I3L4J1 428 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 TADA2AO75478 443 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 GJB5O95377 273 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 ITGB1P05556 798 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 GALTP07902 379 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 PLEKP08567 350 aaPredicted RBP12.13□□□□□ -0.47
TRIO-206ENST00000504606 CLCN1P35523 988 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 PRKCIP41743 596 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
TRIO-206ENST00000504606 AARSP49588 968 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIO-206ENST00000504606 CDK17Q00537 523 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 SOWAHAQ2M3V2 549 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 HGSNATQ68CP4 663 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 CD300LGQ6UXG3 332 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 ADGRF2Q8IZF7 708 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 TTC39CQ8N584 583 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 PHOSPHO2Q8TCD6 241 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 ZBED2Q9BTP6 218 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 FAM124BQ9H5Z6 455 aaPredicted RBP12.13□□□□□ -0.47
TRIO-206ENST00000504606 HAUS4Q9H6D7 363 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 CWH43Q9H720 699 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 MARCH5Q9NX47 278 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 ARHGAP20Q9P2F6 1191 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
TRIO-206ENST00000504606 L1RE1Q9UN81 338 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 CNTN6Q9UQ52 1028 aa12.13□□□□□ -0.47
TRIO-206ENST00000504606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIO-206ENST00000504606 SOWAHDA6NJG2 315 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 NT5C1B-RDH14C9J2C7 533 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 CILPO75339 1184 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 TACC1O75410 805 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 ODC1P11926 461 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 CYP11B1P15538 503 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 ATP2A2P16615 1042 aaKnown RBP12.12□□□□□ -0.47
TRIO-206ENST00000504606 EIF4A3P38919 411 aaKnown RBP12.12□□□□□ -0.47
TRIO-206ENST00000504606 PBX3P40426 434 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 PDE6CP51160 858 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 ZNF132P52740 706 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 NDST1P52848 882 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 BCAR1P56945 870 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 BPIFB4P59827 614 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 HTRA4P83105 476 aaPredicted RBP12.12□□□□□ -0.47
TRIO-206ENST00000504606 PTK2Q05397 1052 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 INCA1Q0VD86 236 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 WSCD1Q658N2 575 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 SMYD5Q6GMV2 418 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 SLC47A2Q86VL8 602 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 KBTBD7Q8WVZ9 684 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 SUSD3Q96L08 255 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 TWNKQ96RR1 684 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 SNX25Q9H3E2 840 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 DEF6Q9H4E7 631 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 NHEJ1Q9H9Q4 299 aaPredicted RBP12.12□□□□□ -0.47
TRIO-206ENST00000504606 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 PUF60Q9UHX1 559 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms