RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TWF1Q12792 350 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 TDGQ13569 410 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 SV2CQ496J9 727 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 WSCD1Q658N2 575 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 TPGS2Q68CL5 300 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 HS2ST1Q7LGA3 356 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 SUGP1Q8IWZ8 645 aaKnown RBP15.38■□□□□ 0.05
HOXC9-202ENST00000504557 C1orf127Q8N9H9 656 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 CCDC127Q96BQ5 260 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 ZNF560Q96MR9 790 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.38■□□□□ 0.05
HOXC9-202ENST00000504557 AFF4Q9UHB7 1163 aaKnown RBP15.38■□□□□ 0.05
HOXC9-202ENST00000504557 FBXL21Q9UKT6 434 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 HPSEQ9Y251 543 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 SLC27A5Q9Y2P5 690 aa15.38■□□□□ 0.05
HOXC9-202ENST00000504557 MRPS23Q9Y3D9 190 aaKnown RBP15.38■□□□□ 0.05
HOXC9-202ENST00000504557 R3HCC1Q9Y3T6 440 aaKnown RBP15.38■□□□□ 0.05
HOXC9-202ENST00000504557 ZNF638Q14966 1978 aaKnown RBP15.38■□□□□ 0.05
HOXC9-202ENST00000504557 GOLGA6L4A6NEF3 574 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 OR6C75A6NL08 312 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 KPNA7A9QM74 516 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 KLRC4O43908 158 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 SOAT2O75908 522 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 CLSTN1O94985 981 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 TNNC2P02585 160 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 RHOP08100 348 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 CFHP08603 1231 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 LAMP2P13473 410 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 TYMPP19971 482 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 EHHADHQ08426 723 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 STK4Q13043 487 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 DUSP4Q13115 394 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 SLC5A9Q2M3M2 681 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 SLC39A12Q504Y0 691 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 NT5DC4Q86YG4 428 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 TCEAL8Q8IYN2 117 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 UBALD2Q8IYN6 164 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 ELMOD1Q8N336 334 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 TTC9BQ8N6N2 239 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 OR5B17Q8NGF7 314 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 FGF13Q92913 245 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 MCRS1Q96EZ8 462 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 ASIC4Q96FT7 647 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 ANKRD36BP1Q96IX9 119 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 RHOBTB2Q9BYZ6 727 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 MFSD1Q9H3U5 465 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 EPS15L1Q9UBC2 864 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 ZDBF2Q9HCK1 2354 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 UBE4BO95155 1302 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 PTPRJQ12913 1337 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 ZNF318Q5VUA4 2279 aa15.37■□□□□ 0.05
HOXC9-202ENST00000504557 ARHGEF37A1IGU5 675 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 KIAA0391O15091 583 aaKnown RBP15.36■□□□□ 0.05
HOXC9-202ENST00000504557 RPN1P04843 607 aaKnown RBP15.36■□□□□ 0.05
HOXC9-202ENST00000504557 MYL4P12829 197 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 PTPN2P17706 415 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 TNNI1P19237 187 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 NUCB2P80303 420 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 POU5F1Q01860 360 aaKnown RBP15.36■□□□□ 0.05
HOXC9-202ENST00000504557 SNRNP35Q16560 246 aaKnown RBP15.36■□□□□ 0.05
HOXC9-202ENST00000504557 KNOP1Q1ED39 458 aaKnown RBP15.36■□□□□ 0.05
HOXC9-202ENST00000504557 HS6ST3Q8IZP7 471 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 THEM5Q8N1Q8 247 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 ATAD1Q8NBU5 361 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 KIAA0895Q8NCT3 520 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 OR10T2Q8NGX3 314 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 TCEAL4Q96EI5 215 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 MFSD14AQ96MC6 490 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 ZNF512Q96ME7 567 aaPredicted RBP15.36■□□□□ 0.05
HOXC9-202ENST00000504557 FNBP1Q96RU3 617 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
HOXC9-202ENST00000504557 KXD1Q9BQD3 176 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 CRISPLD1Q9H336 500 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 IGSF9Q9P2J2 1179 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 ITGA11Q9UKX5 1188 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 CDH7Q9ULB5 785 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 YIPF1Q9Y548 306 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 NUMBLQ9Y6R0 609 aa15.36■□□□□ 0.05
HOXC9-202ENST00000504557 MTMR11A4FU01 709 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 STK25O00506 426 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 EXOC3O60645 756 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 ZNF202O95125 648 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 VNN2O95498 520 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 GJA1P17302 382 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 CEBPBP17676 345 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 ACAT1P24752 427 aaKnown RBP15.35■□□□□ 0.05
HOXC9-202ENST00000504557 PNPLA4P41247 253 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 IQCEQ6IPM2 695 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 PARM1Q6UWI2 310 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 KRBA2Q6ZNG9 492 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 PDZD4Q76G19 769 aaPredicted RBP15.35■□□□□ 0.05
HOXC9-202ENST00000504557 XXYLT1Q8NBI6 393 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 FAM200AQ8TCP9 573 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 CCDC47Q96A33 483 aaKnown RBP15.35■□□□□ 0.05
HOXC9-202ENST00000504557 RPP25Q9BUL9 199 aaKnown RBP15.35■□□□□ 0.05
HOXC9-202ENST00000504557 KIAA1586Q9HCI6 787 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 INTS13Q9NVM9 706 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 CEP72Q9P209 647 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 SIX4Q9UIU6 781 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms