RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ODC1P11926 461 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 ADSSP30520 456 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 ALDH1A3P47895 512 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 AARSP49588 968 aaKnown RBP eCLIP12.94□□□□□ -0.34
MED28-203ENST00000503945 EPHB3P54753 998 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 STARD6P59095 220 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 PFKPQ01813 784 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 TWF1Q12792 350 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 ALCAMQ13740 583 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 SLC44A4Q53GD3 710 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 L1TD1Q5T7N2 865 aaKnown RBP12.94□□□□□ -0.34
MED28-203ENST00000503945 STXBP4Q6ZWJ1 553 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 PDZD4Q76G19 769 aaPredicted RBP12.94□□□□□ -0.34
MED28-203ENST00000503945 NT5DC4Q86YG4 428 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 C1orf210Q8IVY1 113 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 NPAS3Q8IXF0 933 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 CCDC65Q8IXS2 484 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 THEM5Q8N1Q8 247 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 IQUBQ8NA54 791 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 LEMD2Q8NC56 503 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 RMDN1Q96DB5 314 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 TMEM206Q9H813 350 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 OLFML3Q9NRN5 406 aa12.94□□□□□ -0.34
MED28-203ENST00000503945 COL4A3Q01955 1670 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 TISP43B9A030 160 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 CYB561D2O14569 222 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 ECI2O75521 394 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 PPP1R37O75864 691 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 NFICP08651 508 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 KCNA1Q09470 495 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 DUSP4Q13115 394 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 PLD1Q13393 1074 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 SNW1Q13573 536 aaKnown RBP12.93□□□□□ -0.34
MED28-203ENST00000503945 MYBPC2Q14324 1141 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 FOXD4L5Q5VV16 416 aaPredicted RBP12.93□□□□□ -0.34
MED28-203ENST00000503945 CRELD2Q6UXH1 353 aaPredicted RBP12.93□□□□□ -0.34
MED28-203ENST00000503945 MAML2Q8IZL2 1156 aaPredicted RBP12.93□□□□□ -0.34
MED28-203ENST00000503945 TMEM130Q8N3G9 435 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 DCLK2Q8N568 766 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 FOXD4L4Q8WXT5 416 aaPredicted RBP12.93□□□□□ -0.34
MED28-203ENST00000503945 PGLYRP2Q96PD5 576 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 KXD1Q9BQD3 176 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 FAM213AQ9BRX8 229 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 GPR88Q9GZN0 384 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 CUEDC2Q9H467 287 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 ZFP14Q9HCL3 533 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 CEP72Q9P209 647 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 SLC27A5Q9Y2P5 690 aa12.93□□□□□ -0.34
MED28-203ENST00000503945 MTF2Q9Y483 593 aaPredicted RBP12.93□□□□□ -0.34
MED28-203ENST00000503945 CUTAO60888 179 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 YEATS4O95619 227 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 MYL4P12829 197 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 GARTP22102 1010 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 TUFMP49411 452 aaKnown RBP12.92□□□□□ -0.34
MED28-203ENST00000503945 TAF6P49848 677 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 TFAMQ00059 246 aaKnown RBP12.92□□□□□ -0.34
MED28-203ENST00000503945 SLC5A9Q2M3M2 681 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 CENPPQ6IPU0 288 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 PJA1Q8NG27 643 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 ELSPBP1Q96BH3 223 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 NELL2Q99435 816 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 ASAH2Q9NR71 780 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
MED28-203ENST00000503945 R3HCC1Q9Y3T6 440 aaKnown RBP12.92□□□□□ -0.34
MED28-203ENST00000503945 DMXL1Q9Y485 3027 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 A0A087X0B3 334 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 FRMD3A2A2Y4 597 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 KPNA7A9QM74 516 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 PPEF2O14830 753 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 KIAA0391O15091 583 aaKnown RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 SPTLC1O15269 473 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 PNPLA4P41247 253 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 PRKCQQ04759 706 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 FOXD4L6Q3SYB3 417 aaPredicted RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 FAM78AQ5JUQ0 283 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 PRSS36Q5K4E3 855 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 TANGO2Q6ICL3 276 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 FOXD4L3Q6VB84 417 aaPredicted RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 DNAJB7Q7Z6W7 309 aaPredicted RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 ATAD1Q8NBU5 361 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 NOC3LQ8WTT2 800 aaKnown RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 DHX58Q96C10 678 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 TCEAL4Q96EI5 215 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 TRMT61BQ9BVS5 477 aaKnown RBP12.91□□□□□ -0.34
MED28-203ENST00000503945 IKZF4Q9H2S9 585 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 KBTBD4Q9NVX7 518 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 HSFX1Q9UBD0 423 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
MED28-203ENST00000503945 OTOGLQ3ZCN5 2332 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms