RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TSEN2Q8NCE0 465 aaKnown RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 PPTC7Q8NI37 304 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 CPA5Q8WXQ8 436 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 MTMR12Q9C0I1 747 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 MINDY3Q9H8M7 445 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 GBA2Q9HCG7 927 aaPredicted RBP12.32□□□□□ -0.44
USP46-204ENST00000503060 AMACRQ9UHK6 382 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 ACAD8Q9UKU7 415 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 NR2E1Q9Y466 385 aa12.32□□□□□ -0.44
USP46-204ENST00000503060 H0YHG0 523 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 B4GALT5O43286 388 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 SPOPO43791 374 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 S100BP04271 92 aaPredicted RBP12.31□□□□□ -0.44
USP46-204ENST00000503060 FAM153BP0C7A2 387 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 GNA15P30679 374 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 GGCXP38435 758 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 ADCYAP1R1P41586 468 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 SARNPP82979 210 aaKnown RBP12.31□□□□□ -0.44
USP46-204ENST00000503060 CENPCQ03188 943 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 CUL1Q13616 776 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 PPP2R5EQ16537 467 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 FAM153CQ494X1 144 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 MAATS1Q7Z4T9 603 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 THNSL1Q8IYQ7 743 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP46-204ENST00000503060 CYFIP2Q96F07 1278 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 NFKBIZQ9BYH8 718 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 FAM153AQ9UHL3 310 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 TNFSF13BQ9Y275 285 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 GOLGA6L10A0A0M3HER8 536 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 CCDC66A2RUB6 948 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 MAGEB2O15479 319 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 SNAI1O95863 264 aaPredicted RBP12.31□□□□□ -0.44
USP46-204ENST00000503060 HOXC6P09630 235 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 CTNNA1P35221 906 aaKnown RBP12.31□□□□□ -0.44
USP46-204ENST00000503060 PHKA2P46019 1235 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 NSFP46459 744 aaKnown RBP12.31□□□□□ -0.44
USP46-204ENST00000503060 MYL6P60660 151 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 AADACL2Q6P093 401 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 ZNF771Q7L3S4 317 aaPredicted RBP12.31□□□□□ -0.44
USP46-204ENST00000503060 LINC01465Q8N7H1 131 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 WHAMMQ8TF30 809 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 C17orf50Q8WW18 174 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 CDT1Q9H211 546 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 CD248Q9HCU0 757 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 PRMT7Q9NVM4 692 aaPredicted RBP12.31□□□□□ -0.44
USP46-204ENST00000503060 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 PCDHA3Q9Y5H8 950 aa12.31□□□□□ -0.44
USP46-204ENST00000503060 TTI1O43156 1089 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 RNF40O75150 1001 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 CFHP08603 1231 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 ZNF286BP0CG31 522 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 HSPA6P17066 643 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 MAPK4P31152 587 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 NOMO3P69849 1222 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 TFAMQ00059 246 aaKnown RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 SEL1L2Q5TEA6 688 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 ALS2CLQ60I27 953 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 MON1BQ7L1V2 547 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 GPR142Q7Z601 462 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 ADAT2Q7Z6V5 191 aaKnown RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 CDR2LQ86X02 465 aaPredicted RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 RELL1Q8IUW5 271 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 NDUFAF2Q8N183 169 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 MREGQ8N565 214 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 ERVK-5Q9HDB9 667 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 IP6K2Q9UHH9 426 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 ANAPC7Q9UJX3 599 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 COL1A2P08123 1366 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 THAP12O43422 761 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 B4GALT4O60513 344 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 IQCF3P0C7M6 154 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 ECHS1P30084 290 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 OSTNP61366 133 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 TRPC3Q13507 836 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 GRB14Q14449 540 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP46-204ENST00000503060 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 SGSM1Q2NKQ1 1148 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 DNAJC21Q5F1R6 531 aaKnown RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 TAX1BP1Q86VP1 789 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 NPAS4Q8IUM7 802 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 EXOC4Q96A65 974 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 PARK7Q99497 189 aaKnown RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 C16orf70Q9BSU1 422 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 CELF4Q9BZC1 486 aaKnown RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms