RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 UTP14CQ5TAP6 766 aaKnown RBP6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 RRAGBQ5VZM2 374 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 USP37Q86T82 979 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 VGLL2Q8N8G2 317 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 OR56A3Q8NH54 315 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 CFHR4Q92496 578 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 MBD6Q96DN6 1003 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 LRRC46Q96FV0 321 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 LCORQ96JN0 433 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 TBATAQ96M53 351 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 GSTO2Q9H4Y5 243 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 LRFN1Q9P244 771 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 TMX2Q9Y320 296 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 FAM234BA2RU67 622 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 TBKBP1A7MCY6 615 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 SYT5O00445 386 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 PODXLO00592 558 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 VEGFAP15692 232 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 SERPINF1P36955 418 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 RAP2BP61225 183 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 PRKG1Q13976 671 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 PTK2BQ14289 1009 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 SPARCL1Q14515 664 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 UBXN2BQ14CS0 331 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 AMOTQ4VCS5 1084 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 DCAF12L1Q5VU92 463 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 ANKS6Q68DC2 871 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 LVRNQ6Q4G3 990 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 YAF2Q8IY57 180 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 CCDC150Q8NCX0 1101 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 SCAMP4Q969E2 229 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 SPSB4Q96A44 273 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 BORCS6Q96GS4 357 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 TCF25Q9BQ70 676 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 MAGEB5Q9BZ81 275 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 SIK2Q9H0K1 926 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 FBXO34Q9NWN3 711 aa6.27□□□□□ -1.41
HMGB1P3-201ENST00000502802 RASSF9O75901 435 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 NDST3O95803 873 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 CHEK2O96017 543 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 IL1R2P27930 398 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 ZNF135P52742 658 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 ITGA8P53708 1063 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 RIN1Q13671 783 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 POSTNQ15063 836 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 MAPRE1Q15691 268 aaKnown RBP6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 RAB30Q15771 203 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 BMT2Q1RMZ1 405 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 CRB2Q5IJ48 1285 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 FKBP15Q5T1M5 1219 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 KBTBD2Q8IY47 623 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 ADGRG2Q8IZP9 1017 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 CLASRPQ8N2M8 674 aaKnown RBP6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 SHCBP1Q8NEM2 672 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 SORBS1Q9BX66 1292 aaKnown RBP6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 TINAGL1Q9GZM7 467 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 NECTIN3Q9NQS3 549 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 ITM2CQ9NQX7 267 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 TERF2IPQ9NYB0 399 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 RRN3Q9NYV6 651 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 XPR1Q9UBH6 696 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 MID2Q9UJV3 735 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 CNOT6Q9ULM6 557 aaKnown RBP6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 AGAP1Q9UPQ3 857 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 KCTD3Q9Y597 815 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
HMGB1P3-201ENST00000502802 A0A1B0GTL3 188 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 A0A1W2PRX2 142 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 M0QYG6 137 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 MATN2O00339 956 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 ACKR2O00590 384 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 FFAR3O14843 346 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 STC2O76061 302 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 AGFG2O95081 481 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 A1BGP04217 495 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 PIM1P11309 404 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 BTF3P20290 206 aaKnown RBP6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 GABRB3P28472 473 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 IRAK1P51617 712 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 ARL4CP56559 192 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 ATXN7L2Q5T6C5 722 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 CYP26C1Q6V0L0 522 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 RFX8Q6ZV50 586 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 ZNF761Q86XN6 746 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 XYLT1Q86Y38 959 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 GALNT15Q8N3T1 639 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 FITM2Q8N6M3 262 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 GLIS1Q8NBF1 620 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 ZFP28Q8NHY6 868 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 FAM71BQ8TC56 605 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 SNX27Q96L92 541 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 MS4A7Q9GZW8 240 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 RGL1Q9NZL6 768 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 HDAC9Q9UKV0 1011 aa6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 LRRFIP2Q9Y608 721 aaKnown RBP6.25□□□□□ -1.41
HMGB1P3-201ENST00000502802 MROH6A6NGR9 719 aa6.24□□□□□ -1.41
HMGB1P3-201ENST00000502802 AQP12BA6NM10 295 aa6.24□□□□□ -1.41
HMGB1P3-201ENST00000502802 RFXAPO00287 272 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms