RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 LETM2Q2VYF4 491 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 Q4G0T1 1027 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ANKRD20A8PQ5CZ79 823 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ZC3H12AQ5D1E8 599 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 HEATR6Q6AI08 1181 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 PRR5LQ6MZQ0 368 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TMC3Q7Z5M5 1100 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 NECAB2Q7Z6G3 386 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TXNRD3Q86VQ6 643 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ZNF444Q8N0Y2 327 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 AHI1Q8N157 1196 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 OTUD6BQ8N6M0 293 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 METTL13Q8N6R0 699 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CNBD1Q8NA66 436 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 RAPGEF5Q92565 580 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TBC1D5Q92609 795 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PGM2Q96G03 612 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PIGSQ96S52 555 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 KRT12Q99456 494 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PACSIN1Q9BY11 444 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FGFBP2Q9BYJ0 223 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ADAM7Q9H2U9 754 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 SLC40A1Q9NP59 571 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 KLC4Q9NSK0 619 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PANK4Q9NVE7 773 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FAM86C1Q9NVL1 165 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 KLF15Q9UIH9 416 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CAPN7Q9Y6W3 813 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ZSCAN5CA6NGD5 496 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 RGS13O14921 159 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FSCN2O14926 492 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 BUB1O43683 1085 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 MTA2O94776 668 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TOMM70O94826 608 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 EYA4O95677 639 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 BAG3O95817 575 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TSPY3P0CV98 308 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TSPY8P0CW00 308 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CXCR5P32302 372 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 MMP13P45452 471 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ADCY7P51828 1080 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 RING1Q06587 406 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 KLRC3Q07444 240 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 IFFO1Q0D2I5 559 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 GIT2Q14161 759 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 GRIK5Q16478 980 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CYP1B1Q16678 543 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TMEM266Q2M3C6 531 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 GALNTL6Q49A17 601 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FAM26FQ5R3K3 315 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 KRT79Q5XKE5 535 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TBC1D9BQ66K14 1250 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 BTNL9Q6UXG8 535 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TMEM192Q8IY95 271 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CCDC13Q8IYE1 715 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FUKQ8N0W3 1084 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 SYT2Q8N9I0 419 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 LMBR1Q8WVP7 490 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ATXN2LQ8WWM7 1075 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 DDX1Q92499 740 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 PPP1R14AQ96A00 147 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 STRA6Q9BX79 667 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ASPSCR1Q9BZE9 553 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 RAB34Q9BZG1 259 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 GPR88Q9GZN0 384 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 GLT8D2Q9H1C3 349 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PICK1Q9NRD5 415 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 DMAC2Q9NW81 257 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 MTMR4Q9NYA4 1195 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 SUSD2Q9UGT4 822 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 SLC12A4Q9UP95 1085 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 HIF3AQ9Y2N7 669 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CSADQ9Y600 493 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ELOA3CA0A087WX78 387 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 ELOA3DA6NLF2 546 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 DDX3XO00571 662 aaKnown RBP eCLIP4.21□□□□□ -1.74
CLTC-209ENST00000498711 PMM2O15305 246 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 SART1O43290 800 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 KIF1CO43896 1103 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 KATNA1O75449 491 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 TDP2O95551 362 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 FTCDO95954 541 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 ITGAVP06756 1048 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 TMEM253P0C7T8 217 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 HSPA6P17066 643 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CIITAP33076 1130 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 FLT3P36888 993 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 GNALP38405 381 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 TXKP42681 527 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 PTENP60484 403 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 POLR2FP61218 127 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 MCL1Q07820 350 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 ZNF543Q08ER8 600 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 PLS1Q14651 629 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 ELOA3BQ3SY89 546 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CCDC40Q4G0X9 1142 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 TRIM61Q5EBN2 209 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 TDRD10Q5VZ19 366 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 ZDHHC24Q6UX98 284 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 ZNF227Q86WZ6 799 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms