RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 FAM87AP0C7U9 286 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 EIF4BP23588 611 aaKnown RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 GNAQP50148 359 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 CLCN3P51790 818 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 CLCN4P51793 760 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 ATXN1P54253 815 aaKnown RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 NLRP11P59045 1033 aaKnown RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 MESP2Q0VG99 397 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 ITGB3BPQ13352 177 aaPredicted RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 CEP55Q53EZ4 464 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 TWF2Q6IBS0 349 aaKnown RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 PHLDB3Q6NSJ2 640 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 DCLRE1AQ6PJP8 1040 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 GLB1LQ6UWU2 654 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 GET4Q7L5D6 327 aaPredicted RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 HEATR3Q7Z4Q2 680 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 TMEM173Q86WV6 379 aaPredicted RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 ZSWIM9Q86XI8 627 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 CCDC60Q8IWA6 550 aaPredicted RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 ZNF654Q8IZM8 581 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 PJA1Q8NG27 643 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 NCOA7Q8NI08 942 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 URGCPQ8TCY9 931 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 SLC22A17Q8WUG5 538 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 ATRIPQ8WXE1 791 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 RSAD2Q8WXG1 361 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 RSPH1Q8WYR4 309 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 PHKBQ93100 1093 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 IGSF21Q96ID5 467 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 SHDQ96IW2 340 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 MYL10Q9BUA6 226 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 BCO2Q9BYV7 579 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 FOXQ1Q9C009 403 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 PIDD1Q9HB75 910 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 AGO4Q9HCK5 861 aaKnown RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 MAN1C1Q9NR34 630 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 STK39Q9UEW8 545 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 DPP7Q9UHL4 492 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 FOXD3Q9UJU5 478 aaPredicted RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 SMG5Q9UPR3 1016 aaKnown RBP5.79□□□□□ -1.48
NF1-217ENST00000498569 SAMM50Q9Y512 469 aa5.79□□□□□ -1.48
NF1-217ENST00000498569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 A0A0U1RQF3 1178 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 CCDC195A0A1B0GUA6 201 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 hCG_1642624A0A1W2PR95 340 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 CCDC69A6NI79 296 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 INPPL1O15357 1258 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 MAGEB2O15479 319 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 CCNE2O96020 404 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 B3GALT4O96024 378 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 GLUD1P00367 558 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 CNPP09543 421 aaKnown RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 FGFR4P22455 802 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 SFPQP23246 707 aaKnown RBP eCLIP5.78□□□□□ -1.48
NF1-217ENST00000498569 SMARCA1P28370 1054 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 RAP1GAPP47736 663 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 AK2P54819 239 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 DMWDQ09019 674 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 ZNF423Q2M1K9 1284 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 LONRF3Q496Y0 759 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 NOMO2Q5JPE7 1267 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 B4GALNT3Q6L9W6 998 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 SWSAP1Q6NVH7 229 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 EFCAB12Q6NXP0 572 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 SLC23A3Q6PIS1 610 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 CASC1Q6TDU7 716 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 ABHD15Q6UXT9 468 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 CCNJLQ8IV13 435 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 SLC44A3Q8N4M1 653 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 LRRC71Q8N4P6 559 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 FAM181AQ8N9Y4 354 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 SUMF1Q8NBK3 374 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 CMASQ8NFW8 434 aaPredicted RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 FEZF2Q8TBJ5 459 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 SMG7Q92540 1137 aaKnown RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 BORCS6Q96GS4 357 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 PGBD1Q96JS3 809 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 ZNF668Q96K58 619 aaPredicted RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 FAM167AQ96KS9 214 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 KLHL5Q96PQ7 755 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 FAM193BQ96PV7 902 aaPredicted RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 MAP3K14Q99558 947 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 RTKNQ9BST9 563 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 ATXN3LQ9H3M9 355 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 WDR6Q9NNW5 1121 aaKnown RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 MRPL17Q9NRX2 175 aaKnown RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 TBC1D13Q9NVG8 400 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 EPS15L1Q9UBC2 864 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 GMEB2Q9UKD1 530 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 FBXO4Q9UKT5 387 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 RAB23Q9ULC3 237 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 KIF26AQ9ULI4 1882 aaPredicted RBP5.78□□□□□ -1.48
NF1-217ENST00000498569 PCDHGA2Q9Y5H1 932 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 TRIP11Q15643 1979 aa5.78□□□□□ -1.48
NF1-217ENST00000498569 SMG1Q96Q15 3661 aaKnown RBP5.77□□□□□ -1.49
NF1-217ENST00000498569 IGKV6D-21A0A0A0MT36 114 aa5.77□□□□□ -1.49
NF1-217ENST00000498569 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
NF1-217ENST00000498569 E7EWF7 191 aa5.77□□□□□ -1.49
NF1-217ENST00000498569 IPO5O00410 1097 aaKnown RBP5.77□□□□□ -1.49
NF1-217ENST00000498569 N4BP1O75113 896 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms