RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 BPIFB1Q8TDL5 484 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 KIFAP3Q92845 792 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 MTMR9Q96QG7 549 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 TMEM60Q9H2L4 133 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
CDK9-205ENST00000498339 TIMM13Q9Y5L4 95 aaPredicted RBP12.74□□□□□ -0.37
CDK9-205ENST00000498339 TSC2P49815 1807 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 KIAA1549LQ6ZVL6 1849 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 ATRXP46100 2492 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 GIPC1O14908 333 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 ATG13O75143 517 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 KCNE1P15382 129 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 SPINK2P20155 84 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 GABRR2P28476 465 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 PEX3P56589 373 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 CYP4F8P98187 520 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 GRSF1Q12849 480 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDK9-205ENST00000498339 DUSP4Q13115 394 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
CDK9-205ENST00000498339 XKR4Q5GH76 650 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 PLA2G2CQ5R387 149 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 DAB2IPQ5VWQ8 1189 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 HAUS3Q68CZ6 603 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 ALKAL1Q6UXT8 129 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 DIS3L2Q8IYB7 885 aaKnown RBP12.73□□□□□ -0.37
CDK9-205ENST00000498339 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 TMEM209Q96SK2 561 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 ACO2Q99798 780 aaKnown RBP12.73□□□□□ -0.37
CDK9-205ENST00000498339 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
CDK9-205ENST00000498339 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 DNAJC25Q9H1X3 360 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 THG1LQ9NWX6 298 aaKnown RBP12.73□□□□□ -0.37
CDK9-205ENST00000498339 CNTN3Q9P232 1028 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 SLC27A5Q9Y2P5 690 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 OBSL1O75147 1896 aa12.73□□□□□ -0.37
CDK9-205ENST00000498339 ZZEF1O43149 2961 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 CCDC163A0A0D9SF12 145 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 C4orf47A7E2U8 309 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 BTBD18B2RXH4 712 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 SOAT2O75908 522 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 AKAP3O75969 853 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 FGF19O95750 216 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 MCF2P10911 925 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 RPA1P27694 616 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 GBP1P32455 592 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 MATR3P43243 847 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDK9-205ENST00000498339 MCM2P49736 904 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
CDK9-205ENST00000498339 PLK5Q496M5 336 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 SH3PXD2AQ5TCZ1 1133 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 MPZL3Q6UWV2 235 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 DSTYKQ6XUX3 929 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 LRRC3BQ96PB8 259 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 TARS2Q9BW92 718 aaKnown RBP12.72□□□□□ -0.37
CDK9-205ENST00000498339 SMG9Q9H0W8 520 aaKnown RBP12.72□□□□□ -0.37
CDK9-205ENST00000498339 BHMT2Q9H2M3 363 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 TPCN1Q9ULQ1 816 aa12.72□□□□□ -0.37
CDK9-205ENST00000498339 OR6C75A6NL08 312 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 PFKFB2O60825 505 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 RNF40O75150 1001 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 RHOBTB1O94844 696 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 CCT6AP40227 531 aaKnown RBP12.71□□□□□ -0.37
CDK9-205ENST00000498339 VEPH1Q14D04 833 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 TAF12Q16514 161 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 SEZ6Q53EL9 994 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 GAREM2Q75VX8 874 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 DNAJB7Q7Z6W7 309 aaPredicted RBP12.71□□□□□ -0.37
CDK9-205ENST00000498339 BEST2Q8NFU1 509 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.37
CDK9-205ENST00000498339 PSMG2Q969U7 264 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 SEPT5Q99719 369 aaPredicted RBP12.71□□□□□ -0.37
CDK9-205ENST00000498339 MKNK1Q9BUB5 465 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 LRRC3Q9BY71 257 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 OXCT2Q9BYC2 517 aaPredicted RBP12.71□□□□□ -0.37
CDK9-205ENST00000498339 TM6SF1Q9BZW5 370 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 OBP2AQ9NY56 170 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 ASB3Q9Y575 518 aa12.71□□□□□ -0.37
CDK9-205ENST00000498339 CEP295Q9C0D2 2601 aa12.71□□□□□ -0.38
CDK9-205ENST00000498339 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 CAVIN2O95810 425 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 OR52Z1P0C646 297 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 NPTX2P47972 431 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
CDK9-205ENST00000498339 SPAG1Q07617 926 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 STRN3Q13033 797 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 PSMD2Q13200 908 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 NOLC1Q14978 699 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDK9-205ENST00000498339 MGAT5BQ3V5L5 792 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 FSTL4Q6MZW2 842 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms