RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 IGFBP6P24592 240 aaPredicted RBP12.28□□□□□ -0.44
CTTN-208ENST00000498223 MCCD1P59942 119 aaPredicted RBP12.28□□□□□ -0.44
CTTN-208ENST00000498223 PLCB3Q01970 1234 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 USP41Q3LFD5 358 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 TMC7Q7Z402 723 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 CXorf38Q8TB03 319 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 GDPD5Q8WTR4 605 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 SUSD3Q96L08 255 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 B3GALT6Q96L58 329 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 ENTPD7Q9NQZ7 604 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 IFNKQ9P0W0 207 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 POLIQ9UNA4 740 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 COQ4Q9Y3A0 265 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 TIMM13Q9Y5L4 95 aaPredicted RBP12.28□□□□□ -0.44
CTTN-208ENST00000498223 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 C5orf67F2Z3F1 127 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 H3BNC9 293 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 LRRN2O75325 713 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 ASS1P00966 412 aaKnown RBP12.27□□□□□ -0.45
CTTN-208ENST00000498223 SOD2P04179 222 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 URODP06132 367 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 LINC00271P0C7V0 271 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 SLC9A1P19634 815 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 TKTP29401 623 aaKnown RBP12.27□□□□□ -0.45
CTTN-208ENST00000498223 GLUD2P49448 558 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 UBE3AQ05086 875 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 WSCD1Q658N2 575 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 CD300LGQ6UXG3 332 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.27□□□□□ -0.45
CTTN-208ENST00000498223 TAS1R1Q7RTX1 841 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 PPM1KQ8N3J5 372 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 SPPL3Q8TCT6 385 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 POF1BQ8WVV4 589 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 ATXN2LQ8WWM7 1075 aaKnown RBP12.27□□□□□ -0.45
CTTN-208ENST00000498223 PPM1EQ8WY54 764 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 RIN2Q8WYP3 895 aaPredicted RBP12.27□□□□□ -0.45
CTTN-208ENST00000498223 TATDN2Q93075 761 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 TTPALQ9BTX7 342 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 HERC2P3Q9BVR0 1158 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 LSM14BQ9BX40 385 aaKnown RBP12.27□□□□□ -0.45
CTTN-208ENST00000498223 TRIM5Q9C035 493 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 SNX25Q9H3E2 840 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
CTTN-208ENST00000498223 STK39Q9UEW8 545 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 DSEQ9UL01 958 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 MYO7AQ13402 2215 aa12.27□□□□□ -0.45
CTTN-208ENST00000498223 PLXNA3P51805 1871 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 GTPBP10A4D1E9 387 aaKnown RBP12.26□□□□□ -0.45
CTTN-208ENST00000498223 H7C4K7 107 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 M0QZQ0 153 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 RFXAPO00287 272 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 SYN3O14994 580 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 GRM6O15303 877 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 TEX33O43247 280 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 CXCL14O95715 111 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 STAU1O95793 577 aaKnown RBP12.26□□□□□ -0.45
CTTN-208ENST00000498223 PON1P27169 355 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 RAP1GAPP47736 663 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 YWHAEP62258 255 aaKnown RBP12.26□□□□□ -0.45
CTTN-208ENST00000498223 YWHAHQ04917 246 aaPredicted RBP12.26□□□□□ -0.45
CTTN-208ENST00000498223 SYCP1Q15431 976 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 PTPROQ16827 1216 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 UVSSAQ2YD98 709 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 PLPP4Q5VZY2 271 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 OVOS1Q6IE37 1185 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 ADGRF2Q8IZF7 708 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 THEM5Q8N1Q8 247 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 TOP6BLQ8N6T0 577 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 AUTS2Q8WXX7 1259 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 NAP1L5Q96NT1 182 aaPredicted RBP12.26□□□□□ -0.45
CTTN-208ENST00000498223 TCF25Q9BQ70 676 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 NIF3L1Q9GZT8 377 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 XYLT2Q9H1B5 865 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 UBE2TQ9NPD8 197 aaPredicted RBP12.26□□□□□ -0.45
CTTN-208ENST00000498223 PRDM6Q9NQX0 595 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 TLR9Q9NR96 1032 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 MRPL17Q9NRX2 175 aaKnown RBP12.26□□□□□ -0.45
CTTN-208ENST00000498223 GDAP2Q9NXN4 497 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 THEGQ9P2T0 379 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 LZTS1Q9Y250 596 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 SSX2IPQ9Y2D8 614 aa12.26□□□□□ -0.45
CTTN-208ENST00000498223 A0A1B0GTH6 734 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 GOLGA6L3A6NEY3 463 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 EPOPA6NHQ4 379 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 WEE2P0C1S8 567 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 CD58P19256 250 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 TYMPP19971 482 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 POU3F3P20264 500 aaPredicted RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 FGFR3P22607 806 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 TBXAS1P24557 533 aaPredicted RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 AARSP49588 968 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTTN-208ENST00000498223 CDH8P55286 799 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 ARPP19P56211 112 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 SMC1AQ14683 1233 aaKnown RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 CCDC85BQ15834 202 aaPredicted RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 PSMD5Q16401 504 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms