RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 HUS1O60921 280 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 RFPL2O75678 378 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 C8AP07357 584 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 KRT13P13646 458 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 PPP1R2P41236 205 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 CASP4P49662 377 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 AP3M2P53677 418 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 ROR1Q01973 937 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 ZP2Q05996 745 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 ADAM9Q13443 819 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 BIRC3Q13489 604 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 TRPC3Q13507 836 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 CAMK4Q16566 473 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 NFIL3Q16649 462 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 COBLL1Q53SF7 1204 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 PPM1LQ5SGD2 360 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 TPGS2Q68CL5 300 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 C15orf39Q6ZRI6 1047 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 CCDC149Q6ZUS6 474 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 TRAPPC11Q7Z392 1133 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 GPR149Q86SP6 731 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 THEM5Q8N1Q8 247 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 ZNF461Q8TAF7 563 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 SLC7A14Q8TBB6 771 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 SMG7Q92540 1137 aaKnown RBP12.64□□□□□ -0.39
MRPL55-234ENST00000497758 HPDLQ96IR7 371 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 PHF7Q9BWX1 381 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-234ENST00000497758 SIX4Q9UIU6 781 aa12.64□□□□□ -0.39
MRPL55-234ENST00000497758 CETN3O15182 167 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 MAPK13O15264 365 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 TBC1D4O60343 1298 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 XYLBO75191 536 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 ZMYND10O75800 440 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 CYP11A1P05108 521 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 HNRNPA1P09651 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
MRPL55-234ENST00000497758 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
MRPL55-234ENST00000497758 PSMC2P35998 433 aaKnown RBP12.63□□□□□ -0.39
MRPL55-234ENST00000497758 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 WSCD1Q658N2 575 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 INTS8Q75QN2 995 aaKnown RBP12.63□□□□□ -0.39
MRPL55-234ENST00000497758 RTL10Q7L3V2 364 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 ADSSL1Q8N142 457 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 GJD3Q8N144 294 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 PARD3BQ8TEW8 1205 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 RPGRIP1Q96KN7 1286 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 CDH22Q9UJ99 828 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 POLIQ9UNA4 740 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 NR2E1Q9Y466 385 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 SNX9Q9Y5X1 595 aa12.63□□□□□ -0.39
MRPL55-234ENST00000497758 PLXNA3P51805 1871 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 WDR27A2RRH5 827 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-234ENST00000497758 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 AKAP3O75969 853 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 ABLIM3O94929 683 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 ATF2P15336 505 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 SP100P23497 879 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-234ENST00000497758 VAMP7P51809 220 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 LRRC63Q05C16 580 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 UVSSAQ2YD98 709 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 CENPPQ6IPU0 288 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 KLHL10Q6JEL2 608 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 TMEM86AQ8N2M4 240 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 PDCL2Q8N4E4 241 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 CXorf38Q8TB03 319 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-234ENST00000497758 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 CYP4F11Q9HBI6 524 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 GDAP2Q9NXN4 497 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 AFF4Q9UHB7 1163 aaKnown RBP12.62□□□□□ -0.39
MRPL55-234ENST00000497758 MAFFQ9ULX9 164 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 MUC3AQ02505 3323 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 SCN1AP35498 2009 aa12.62□□□□□ -0.39
MRPL55-234ENST00000497758 BICDL2A1A5D9 508 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 IKBKBO14920 756 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 CCL16O15467 120 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 LRG1P02750 347 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 CCNE1P24864 410 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 HOXA9P31269 272 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 TNNC1P63316 161 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 CLDN10P78369 228 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
MRPL55-234ENST00000497758 TSPY1Q01534 308 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 ADCY1Q08828 1119 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 GPR17Q13304 367 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 NCOA4Q13772 614 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 MORC3Q14149 939 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 TDRD10Q5VZ19 366 aaKnown RBP12.61□□□□□ -0.39
MRPL55-234ENST00000497758 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 RNF19BQ6ZMZ0 732 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 TCEAL8Q8IYN2 117 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 ADGRF2Q8IZF7 708 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 TOP6BLQ8N6T0 577 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms